name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_063_368G1_scaffold_64_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(87..2009)
|
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:KFI42674.1}; EC=3.6.5.- {ECO:0000313|EMBL:KFI42674.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
typA; GTP-binding protein TypA (EC:2.7.7.4)
GTP-binding protein TypA/BipA n=7 Tax=Bifidobacterium RepID=E4P0S7_BIFBP
|
|
L3_063_368G1_scaffold_64_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(2190..3467)
|
iscS; putative cysteine desulfurase (EC:2.8.1.7)
Putative cysteine desulfurase {ECO:0000313|EMBL:AFL04180.1}; EC=2.8.1.7 {ECO:0000313|EMBL:AFL04180.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Putative cysteine desulfurase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WH17_BIFBI
|
|
L3_063_368G1_scaffold_64_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3470..4363)
|
nadC; nicotinate-nucleotide diphosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EKE50543.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EKE50543.1};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HSX2_BIFBI
|
|
L3_063_368G1_scaffold_64_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(4497..6149)
|
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L-aspartate oxidase n=4 Tax=Bifidobacterium bifidum RepID=E3ENV4_BIFBS
nadB; L-aspartate oxidase
|
|
L3_063_368G1_scaffold_64_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(6202..7482)
|
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Quinolinate synthase A n=5 Tax=Bifidobacterium RepID=I3WH14_BIFBI
nadA; quinolinate synthetase complex subunit A
|
|
L3_063_368G1_scaffold_64_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(7600..8412)
|
phosphohydrolase (EC:3.6.1.13)
Phosphohydrolase (MutT/nudix family protein) n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0S2_BIFBP
Phosphohydrolase (MutT/nudix family protein) {ECO:0000313|EMBL:ADO52827.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_063_368G1_scaffold_64_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(8586..9158)
|
Segregation and condensation protein B n=3 Tax=Bifidobacterium bifidum RepID=E3ENV1_BIFBS
scpB; segregation and condensation protein ScpB
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
|
|
L3_063_368G1_scaffold_64_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(9255..10109)
|
Segregation and condensation protein A n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HSW7_BIFBI
scpA; segregation and condensation protein A
Segregation and condensation protein A {ECO:0000313|EMBL:EKE50538.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
|
|
L3_063_368G1_scaffold_64_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(10146..11165)
|
Chromosome partitioning protein n=5 Tax=Bifidobacterium bifidum RepID=E3ENU9_BIFBS
chromosome partitioning protein
ParA Chromosome partitioning protein {ECO:0000313|EMBL:KFI42666.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_063_368G1_scaffold_64_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(11227..12195)
|
Tyrosine recombinase XerD n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H956_BIFBI
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
integrase/recombinase
|
|
L3_063_368G1_scaffold_64_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(12344..12727)
|
50S ribosomal protein L20 n=8 Tax=Bifidobacterium RepID=E3ENU7_BIFBS
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_063_368G1_scaffold_64_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(12775..12969)
|
50S ribosomal protein L35 n=8 Tax=Bifidobacterium RepID=E3ENU6_BIFBS
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
|
|
L3_063_368G1_scaffold_64_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(12988..13719)
|
Translation initiation factor IF-3 n=9 Tax=Bifidobacterium RepID=E3ENU5_BIFBS
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
infC; protein translation Initiation Factor 3
|
|
L3_063_368G1_scaffold_64_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(13923..14075)
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GN79_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22706.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
|
|
L3_063_368G1_scaffold_64_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(14060..14245)
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WH03_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04166.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_063_368G1_scaffold_64_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
14354..15082
|
thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine pyrophosphokinase {ECO:0000313|EMBL:AFL04165.1}; EC=2.7.6.2 {ECO:0000313|EMBL:AFL04165.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Thiamine pyrophosphokinase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WH02_BIFBI
|
|
L3_063_368G1_scaffold_64_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
15289..16344
|
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Gap Glyceraldehyde 3-phosphate dehydrogenase n=6 Tax=Bifidobacterium RepID=E3ENU2_BIFBS
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:EKE50527.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
|
|
L3_063_368G1_scaffold_64_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(16483..17001)
|
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENU1_BIFBS
YbaK / prolyl-tRNA synthetases associated domain
|
|
L3_063_368G1_scaffold_64_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(17421..18410)
|
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IP46_BIFBI
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
|
|
L3_063_368G1_scaffold_64_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18641..19597
|
Aldose 1-epimerase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENT8_BIFBS
aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:ADO52813.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_063_368G1_scaffold_64_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(19972..20340)
|
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WGZ5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42654.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_063_368G1_scaffold_64_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(20333..20974)
|
RNA polymerase ECF-type sigma factor n=3 Tax=Bifidobacterium RepID=E3ENT6_BIFBS
rpoE; RNA polymerase sigma-E factor
SigH RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:KFI42653.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_063_368G1_scaffold_64_23
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
21114..22745
|
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|SAAS:SAAS00276926};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-lysine ligase n=3 Tax=Bifidobacterium RepID=R6GN68_9BIFI
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-lysine ligase
|
|
L3_063_368G1_scaffold_64_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
22790..23788
|
Cell wall biosynthesis-associated protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0Q5_BIFBP
cell wall biosynthesis-associated protein
Uncharacterized protein {ECO:0000313|EMBL:EFR49950.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
|
|
L3_063_368G1_scaffold_64_25
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(23867..25072)
|
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GM17_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22694.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_063_368G1_scaffold_64_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
25251..26486
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LDN7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF15939.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
|
|
L3_063_368G1_scaffold_64_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26545..27237
|
racD; aspartate racemase (EC:5.1.1.13)
Aspartate racemase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H933_BIFBI
Aspartate racemase {ECO:0000313|EMBL:EKF15940.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
|
|
L3_063_368G1_scaffold_64_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(27411..31073)
|
Chromosome partition protein Smc n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGY7_BIFBI
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
smc; chromosome segregation protein
|
|
L3_063_368G1_scaffold_64_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(31079..32707)
|
Folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M1G2_BIFBI
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:EKF15751.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
folC; Folylpolyglutamate synthase/dihydrofolate synthase
|
|
L3_063_368G1_scaffold_64_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
32981..33082
|
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2HSU0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ97772.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
|