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L3_063_368G1_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_85_1
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(345..1142)
DNA (798bp) protein (266aa)
S1/P1 Nuclease n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V2T5_9BACT
S1/P1 Nuclease {ECO:0000313|EMBL:CCZ75252.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
S1/P1 Nuclease
L3_063_368G1_scaffold_85_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1235..3052)
DNA (1818bp) protein (606aa)
SusD family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M8C0_9BACT
SusD family protein {ECO:0000313|EMBL:EFR58881.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
RagB/SusD family protein
L3_063_368G1_scaffold_85_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3083..6634)
DNA (3552bp) protein (1184aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Alistipes RepID=I3YMT9_ALIFI
SusC/RagA family TonB-linked outer membrane protein
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCZ75250.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_063_368G1_scaffold_85_4
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6679..7680)
DNA (1002bp) protein (334aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alistipes sp. HGB5 RepID=E4M8B8_9BACT
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFR58877.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Fe2+-dicitrate sensor membrane protein
L3_063_368G1_scaffold_85_5
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7788..8414)
DNA (627bp) protein (209aa)
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=2 Tax=Alistipes RepID=I3YMU1_ALIFI
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFR58769.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_063_368G1_scaffold_85_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8653..9318)
DNA (666bp) protein (222aa)
HD domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M8B6_9BACT
HD domain protein {ECO:0000313|EMBL:EFR58876.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
HD superfamily hydrolase
L3_063_368G1_scaffold_85_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9390..10157
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YMU3_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78311.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_85_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10154..10651
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M8B4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58803.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_063_368G1_scaffold_85_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10654..11385
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YMU5_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78313.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_85_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11503..13050)
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Ribonuclease Y n=3 Tax=Alistipes RepID=I3YMU6_ALIFI
hypothetical protein
L3_063_368G1_scaffold_85_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13373..13672)
DNA (300bp) protein (100aa)
Cell division protein ZapA n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V2S6_9BACT
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Cell division protein ZapA
L3_063_368G1_scaffold_85_12
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13768..14061)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UVU5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75241.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_063_368G1_scaffold_85_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14126..15424)
DNA (1299bp) protein (433aa)
30S ribosomal protein S12 (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YMU9_ALIFI
L3_063_368G1_scaffold_85_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15528..16373)
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YMV1_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75238.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_063_368G1_scaffold_85_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16405..17229)
DNA (825bp) protein (275aa)
Metal-dependent hydrolase n=3 Tax=Alistipes RepID=I3YMV2_ALIFI
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:CCZ75237.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_063_368G1_scaffold_85_16
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17255..18886)
DNA (1632bp) protein (544aa)
RagB/SusD family protein n=2 Tax=Alistipes RepID=I3YMV3_ALIFI
RagB/SusD family protein
RagB/SusD family protein {ECO:0000313|EMBL:AFL78321.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_85_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18898..22116)
DNA (3219bp) protein (1073aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Alistipes sp. HGB5 RepID=E4M8A5_9BACT
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFR58897.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
SusC/RagA family TonB-linked outer membrane protein
L3_063_368G1_scaffold_85_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22474..23484)
DNA (1011bp) protein (337aa)
Signal recognition particle receptor FtsY n=2 Tax=Alistipes RepID=I3YMV5_ALIFI
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_85_19
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23567..24475
DNA (909bp) protein (303aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YMV6_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:EFR58798.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_063_368G1_scaffold_85_20
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24556..26565)
DNA (2010bp) protein (670aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFR58916.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFR58916.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M8A2_9BACT
glycosyl transferase, group 1
L3_063_368G1_scaffold_85_21
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26808..26966)
DNA (159bp) protein (53aa)
Uncharacterized protein n=4 Tax=Alistipes RepID=I3YMV9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78327.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_85_22
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(26979..27161)
DNA (183bp) protein (61aa)
50S ribosomal protein L33 n=3 Tax=Alistipes RepID=I3YMW0_ALIFI
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_85_23
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27178..27411)
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=4 Tax=Alistipes RepID=I3YMW1_ALIFI
50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_85_24
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27539..29185)
DNA (1647bp) protein (549aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Signal transduction histidine kinase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YMW2_ALIFI
signal transduction histidine kinase
L3_063_368G1_scaffold_85_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29526..30074)
DNA (549bp) protein (183aa)
Competence/damage-inducible domain protein CinA n=1 Tax=Alistipes sp. HGB5 RepID=E4M896_9BACT
Competence/damage-inducible domain protein CinA {ECO:0000313|EMBL:EFR58942.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
competence/damage-inducible protein CinA-like protein
L3_063_368G1_scaffold_85_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30087..31328)
DNA (1242bp) protein (414aa)
CinA-like protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M895_9BACT
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
competence/damage-inducible protein CinA-like protein
L3_063_368G1_scaffold_85_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31345..32622)
DNA (1278bp) protein (426aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
dihydroorotate oxidase A (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Alistipes sp. HGB5 RepID=E4M894_9BACT
L3_063_368G1_scaffold_85_28
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32681..33676)
DNA (996bp) protein (332aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFR58844.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFR58844.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
phosphoglycerate dehydrogenase-like oxidoreductase (EC:1.1.1.290)
4-phosphoerythronate dehydrogenase n=1 Tax=Alistipes sp. HGB5 RepID=E4M893_9BACT
L3_063_368G1_scaffold_85_29
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33771..34811
DNA (1041bp) protein (347aa)
Arginase family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M892_9BACT
Arginase family protein {ECO:0000313|EMBL:EFR58767.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
arginase family hydrolase
L3_063_368G1_scaffold_85_30
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34827..36191
DNA (1365bp) protein (455aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Alistipes RepID=R5V2Q6_9BACT
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
sodium/proton antiporter, NhaA family
Displaying items 1-30 of 136 in total

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