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L3_063_368G1_scaffold_189

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Displaying items 1-30 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_189_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(82..1299)
DNA (1218bp) protein (406aa)
Site-specific recombinase, phage integrase family (Fragment) n=1 Tax=Alistipes sp. HGB5 RepID=E4MCI5_9BACT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFR57277.1}; Flags: Fragment;; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
site-specific recombinase XerD
L3_063_368G1_scaffold_189_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1679..2983)
DNA (1305bp) protein (435aa)
Beta-galactosidase/beta-glucuronidase n=2 Tax=Alistipes RepID=I3YPH1_ALIFI
beta-galactosidase/beta-glucuronidase
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:AFL78889.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_189_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3108..3560
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YPH2_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78890.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_189_4
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3555..4301)
DNA (747bp) protein (249aa)
LytTr DNA-binding domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MCI8_9BACT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EFR57328.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
response regulator of the LytR/AlgR family
L3_063_368G1_scaffold_189_5
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4294..5367)
DNA (1074bp) protein (358aa)
Histidine kinase n=1 Tax=Alistipes sp. HGB5 RepID=E4MCI9_9BACT
Histidine kinase {ECO:0000313|EMBL:EFR57297.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
regulator of cell autolysis
L3_063_368G1_scaffold_189_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5535..7235)
DNA (1701bp) protein (567aa)
AMP-binding enzyme n=1 Tax=Alistipes sp. HGB5 RepID=E4MCJ0_9BACT
AMP-binding enzyme {ECO:0000313|EMBL:EFR57324.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
AMP-forming long-chain acyl-CoA synthetase
L3_063_368G1_scaffold_189_7
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7365..8063)
DNA (699bp) protein (233aa)
Glycerol-3-phosphate acyltransferase n=3 Tax=Alistipes RepID=I3YPH8_ALIFI
acyl-phosphate glycerol 3-phosphate acyltransferase
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_063_368G1_scaffold_189_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8199..9188
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MCJ2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57288.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_063_368G1_scaffold_189_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9178..10566
DNA (1389bp) protein (463aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YPI0_ALIFI
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
L3_063_368G1_scaffold_189_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10583..12091
DNA (1509bp) protein (503aa)
DEAD/DEAH box helicase n=1 Tax=Alistipes sp. HGB5 RepID=E4MCJ4_9BACT
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFR57271.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA/RNA helicase
L3_063_368G1_scaffold_189_11
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12312..13616)
DNA (1305bp) protein (435aa)
GTPase Der n=3 Tax=Alistipes RepID=I3YPI2_ALIFI
ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_189_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13808..15874)
DNA (2067bp) protein (689aa)
Transporter, CPA2 family n=1 Tax=Alistipes sp. HGB5 RepID=E4MCJ6_9BACT
Transporter, CPA2 family {ECO:0000313|EMBL:EFR57349.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Kef-type K+ transport system membrane protein
L3_063_368G1_scaffold_189_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15916..16761)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MCJ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57379.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_063_368G1_scaffold_189_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16881..18032
DNA (1152bp) protein (384aa)
Fucose permease n=2 Tax=Alistipes RepID=I3YPI4_ALIFI
fucose permease
Fucose permease {ECO:0000313|EMBL:AFL78902.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_189_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18045..18641
DNA (597bp) protein (199aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YPI5_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78903.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_368G1_scaffold_189_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18645..19616
DNA (972bp) protein (324aa)
PhoH family protein n=2 Tax=Alistipes RepID=E4MCK0_9BACT
PhoH family protein {ECO:0000313|EMBL:EFR57274.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
phosphate starvation-inducible protein PhoH
L3_063_368G1_scaffold_189_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19817..21286
DNA (1470bp) protein (490aa)
Aminoacyl-histidine dipeptidase n=2 Tax=Alistipes RepID=I3YPI7_ALIFI
aminoacyl-histidine dipeptidase
Xaa-His dipeptidase {ECO:0000313|EMBL:EFR57269.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_063_368G1_scaffold_189_18
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21293..22279
DNA (987bp) protein (329aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EFR57325.1}; EC=2.7.1.- {ECO:0000313|EMBL:EFR57325.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Lipid kinase, YegS/Rv2252/BmrU family n=1 Tax=Alistipes sp. HGB5 RepID=E4MCK2_9BACT
hypothetical protein
L3_063_368G1_scaffold_189_19
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22434..22781)
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC41945.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;"
L3_063_368G1_scaffold_189_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22970..23545)
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MCK4_9BACT
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:CCZ75689.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_063_368G1_scaffold_189_21
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23696..24079
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YPJ1_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75690.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_063_368G1_scaffold_189_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24353..25108)
DNA (756bp) protein (252aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Alistipes sp. HGB5 RepID=E4MCK6_9BACT
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EFR57402.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
nicotinamide mononucleotide transporter
L3_063_368G1_scaffold_189_23
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25166..27664)
DNA (2499bp) protein (833aa)
TonB-dependent receptor n=1 Tax=Alistipes sp. HGB5 RepID=E4MCK7_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EFR57436.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
outer membrane receptor protein
L3_063_368G1_scaffold_189_24
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28232..29656)
DNA (1425bp) protein (475aa)
MFS transporter, SP family n=1 Tax=Alistipes sp. HGB5 RepID=E4MCK8_9BACT
MFS transporter, SP family {ECO:0000313|EMBL:EFR57295.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
sugar family MFS transporter
L3_063_368G1_scaffold_189_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29661..30974)
DNA (1314bp) protein (438aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
D-xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Alistipes sp. HGB5 RepID=E4MCK9_9BACT
L3_063_368G1_scaffold_189_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30998..32482)
DNA (1485bp) protein (495aa)
Carbohydrate kinase, FGGY family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MCL0_9BACT
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EFR57415.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
pentulose/hexulose kinase
L3_063_368G1_scaffold_189_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32503..33249)
DNA (747bp) protein (249aa)
Hydrolase, NUDIX family n=2 Tax=Alistipes RepID=E4MCL1_9BACT
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ75466.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
NUDIX family protein
L3_063_368G1_scaffold_189_28
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33561..34619)
DNA (1059bp) protein (353aa)
galactose mutarotase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Aldose 1-epimerase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YPJ9_ALIFI
L3_063_368G1_scaffold_189_29
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34619..36151)
DNA (1533bp) protein (511aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Glutamate--tRNA ligase n=3 Tax=Alistipes RepID=I3YPK0_ALIFI
glutamyl-tRNA synthetase
L3_063_368G1_scaffold_189_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36199..37299)
DNA (1101bp) protein (367aa)
Ribosome-binding ATPase YchF n=3 Tax=Alistipes RepID=I3YPK1_ALIFI
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying items 1-30 of 179 in total

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