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L3_063_368G1_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_229_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(624..1937)
DNA (1314bp) protein (438aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Parabacteroides sp. D25 RepID=K5ZGN9_9PORP
Threonine synthase {ECO:0000313|EMBL:EKN26052.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_063_368G1_scaffold_229_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1941..3149)
DNA (1209bp) protein (403aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
Putative homoserine kinase n=1 Tax=Parabacteroides sp. D25 RepID=K6BDB2_9PORP
Putative homoserine kinase {ECO:0000313|EMBL:EKN26053.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_063_368G1_scaffold_229_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3152..5593)
DNA (2442bp) protein (814aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:EEU49721.1}; EC=1.1.1.3 {ECO:0000313|EMBL:EEU49721.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Aspartokinase/homoserine dehydrogenase n=10 Tax=Bacteroidales RepID=A6L8N2_PARD8
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I
L3_063_368G1_scaffold_229_4
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5876..6841)
DNA (966bp) protein (322aa)
Integral membrane protein DUF6 n=2 Tax=Bacteroidales RepID=D7IVR5_9BACE
Integral membrane protein DUF6 {ECO:0000313|EMBL:EFI07425.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_063_368G1_scaffold_229_5
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6998..7861)
DNA (864bp) protein (288aa)
ATP synthase gamma chain n=3 Tax=Parabacteroides RepID=C7XEF5_9PORP
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
F0F1 ATP synthase subunit gamma
L3_063_368G1_scaffold_229_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7849..9426)
DNA (1578bp) protein (526aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=4 Tax=Parabacteroides RepID=C7XEF4_9PORP
L3_063_368G1_scaffold_229_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9439..9981)
DNA (543bp) protein (181aa)
ATP synthase subunit delta n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=ATPD_PARD8
F0F1 ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; Short=F-ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_063_368G1_scaffold_229_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9985..10485)
DNA (501bp) protein (167aa)
ATP synthase subunit b n=9 Tax=Bacteroidales RepID=ATPF_PARD8
ATP synthase subunit B
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_063_368G1_scaffold_229_9
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10500..10754)
DNA (255bp) protein (85aa)
ATP synthase F0, C subunit n=9 Tax=Bacteroidales RepID=C7XEF1_9PORP
ATP synthase subunit C
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_063_368G1_scaffold_229_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10817..11863)
DNA (1047bp) protein (349aa)
ATP synthase subunit a n=4 Tax=Bacteroidales RepID=A6L8N9_PARD8
ATP synthase subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_063_368G1_scaffold_229_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11844..12248)
DNA (405bp) protein (135aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6L8P0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN26062.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_063_368G1_scaffold_229_12
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12288..12521)
DNA (234bp) protein (78aa)
ATP synthase epsilon chain n=9 Tax=Bacteroidales RepID=A6L8P1_PARD8
ATP synthase subunit epsilon
ATP synthase epsilon chain {ECO:0000313|EMBL:CDB47980.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_063_368G1_scaffold_229_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12527..14044)
DNA (1518bp) protein (506aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
ATP synthase subunit beta n=5 Tax=Bacteroidales RepID=ATPB_PARD8
L3_063_368G1_scaffold_229_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14422..15153
DNA (732bp) protein (244aa)
Copper homeostasis protein CutC n=7 Tax=Bacteroidales RepID=CUTC_PARD8
copper homeostasis protein
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_063_368G1_scaffold_229_15
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15321..15701
DNA (381bp) protein (127aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L8P4_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB47983.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_063_368G1_scaffold_229_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15792..16955
DNA (1164bp) protein (388aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides sp. D13 RepID=C7XEE4_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEU49708.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
multidrug resistance protein
L3_063_368G1_scaffold_229_17
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16961..20119
DNA (3159bp) protein (1053aa)
Cation/multidrug efflux pump n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IFL0_9PORP
Cation/multidrug efflux pump {ECO:0000313|EMBL:CDB47985.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
cation/multidrug efflux pump
L3_063_368G1_scaffold_229_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20109..21551
DNA (1443bp) protein (481aa)
Putative multidrug resistance protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6L8P7_PARD8
multidrug resistance protein
Putative multidrug resistance protein {ECO:0000313|EMBL:ABR42061.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_063_368G1_scaffold_229_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21784..24429
DNA (2646bp) protein (882aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6L8P8_PARD8
Uncharacterized protein {ECO:0000313|EMBL:ABR42062.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
hypothetical protein
L3_063_368G1_scaffold_229_20
unknown

Not on your lists

24715..24837
DNA (123bp) protein (41aa)

This feature has no annotations

L3_063_368G1_scaffold_229_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24867..27914
DNA (3048bp) protein (1016aa)
Outer membrane protein n=4 Tax=Bacteroidales RepID=D7IVT1_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI07441.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_063_368G1_scaffold_229_22
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27932..29731
DNA (1800bp) protein (600aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K6ADG7_9PORP
hypothetical protein
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDB47989.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_063_368G1_scaffold_229_23
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29764..30660
DNA (897bp) protein (299aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L8Q1_PARD8
hexulose-6-phosphate isomerase
AP endonuclease, family 2 {ECO:0000313|EMBL:EEU49702.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_063_368G1_scaffold_229_24
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30844..31038
DNA (195bp) protein (65aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L8Q2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ83573.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_063_368G1_scaffold_229_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31042..33063
DNA (2022bp) protein (674aa)
UvrABC system protein B n=4 Tax=Parabacteroides RepID=A6L8Q3_PARD8
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
excinuclease ABC subunit B
L3_063_368G1_scaffold_229_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33067..33939
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YV05_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS75200.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_063_368G1_scaffold_229_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33933..36137)
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AQS7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN18088.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_063_368G1_scaffold_229_28
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36300..37001
DNA (702bp) protein (234aa)
Transcriptional regulator n=9 Tax=Bacteroidales RepID=A6L8Q5_PARD8
transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EFI07448.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_063_368G1_scaffold_229_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37064..37867)
DNA (804bp) protein (268aa)
3-deoxy-8-phosphooctulonate synthase {ECO:0000313|EMBL:KDS75203.1}; EC=2.5.1.55 {ECO:0000313|EMBL:KDS75203.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
3-deoxy-8-phosphooctulonate synthase n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A3E2_9PORP
L3_063_368G1_scaffold_229_30
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37864..38787)
DNA (924bp) protein (308aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
tRNA dimethylallyltransferase 1 n=7 Tax=Bacteroidales RepID=MIAA1_PARD8
Displaying items 1-30 of 123 in total

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