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L3_063_368G1_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_247_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81..911)
DNA (831bp) protein (277aa)
ABC-type polar amino acid transport system ATPase component n=6 Tax=Bifidobacterium RepID=B3DTB1_BIFLD
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY33155.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
ABC transporter ATP-binding protein
L3_063_368G1_scaffold_247_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(927..1922)
DNA (996bp) protein (332aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASU1_BIFLN
ABC transporter, permease protein {ECO:0000313|EMBL:EIJ32177.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hisM6; hism6
L3_063_368G1_scaffold_247_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2053..2994)
DNA (942bp) protein (314aa)
ABC transporter substrate-binding protein n=5 Tax=Bifidobacterium longum RepID=F8ASB9_BIFLN
ABC transporter solute-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEI97999.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_063_368G1_scaffold_247_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3128..4081)
DNA (954bp) protein (318aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSX8_BIFLJ
family 3 extracellular solute-binding protein
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:ADG99983.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_063_368G1_scaffold_247_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4244..4720)
DNA (477bp) protein (159aa)
SsrA-binding protein n=20 Tax=Bifidobacterium RepID=SSRP_BIFLD
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_063_368G1_scaffold_247_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4885..6246)
DNA (1362bp) protein (454aa)
CHAP domain-containing protein n=2 Tax=Bifidobacterium RepID=E5XYE2_9BIFI
amidase
Amidase {ECO:0000313|EMBL:AIW43424.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_063_368G1_scaffold_247_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6349..7272)
DNA (924bp) protein (308aa)
Cell division protein FtsX n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8L0_BIFLI
cell division protein FtsX
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_063_368G1_scaffold_247_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7284..8453)
DNA (1170bp) protein (390aa)
FtsE-like ATP binding protein involved in cell division n=2 Tax=Bifidobacterium longum RepID=F8ASC4_BIFLN
ftsE; FtsE-like ATP binding protein involved in cell division
FtsE-like ATP binding protein involved in cell division {ECO:0000313|EMBL:AEI98004.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_063_368G1_scaffold_247_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8462..9586)
DNA (1125bp) protein (375aa)
Peptide chain release factor 2 n=15 Tax=Bifidobacterium longum RepID=B3DTB9_BIFLD
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_063_368G1_scaffold_247_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9969..11450)
DNA (1482bp) protein (494aa)
DNA polymerase III epsilon subunit n=3 Tax=Bifidobacterium longum RepID=B3DTC0_BIFLD
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:ACD98389.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_063_368G1_scaffold_247_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11447..12100)
DNA (654bp) protein (218aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Peptide deformylase 1 n=12 Tax=Bifidobacterium RepID=DEF1_BIFLO
def2; def2
L3_063_368G1_scaffold_247_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12124..13509)
DNA (1386bp) protein (462aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Phosphoglucosamine mutase n=14 Tax=Bifidobacterium RepID=GLMM_BIFLD
phosphomannomutase
L3_063_368G1_scaffold_247_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13703..13942)
DNA (240bp) protein (80aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DTC3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ21877.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_063_368G1_scaffold_247_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13958..14290)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4QZZ9_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY33168.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_063_368G1_scaffold_247_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14489..15376)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=D6ZSW4_BIFLJ
hypothetical protein
Permease {ECO:0000313|EMBL:KEY33169.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_063_368G1_scaffold_247_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15553..18162)
DNA (2610bp) protein (870aa)
Membrane alanyl aminopeptidase {ECO:0000313|EMBL:EIJ21915.1}; EC=3.4.11.2 {ECO:0000313|EMBL:EIJ21915.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Membrane alanyl aminopeptidase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AS22_BIFLN
aminopeptidase
L3_063_368G1_scaffold_247_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18204..20096)
DNA (1893bp) protein (631aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G528_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:AAN24997.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L3_063_368G1_scaffold_247_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20139..21065)
DNA (927bp) protein (309aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Bifidobacterium RepID=R5NBI0_9BIFI
dihydrodipicolinate synthase
L3_063_368G1_scaffold_247_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21207..21962)
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
4-hydroxy-tetrahydrodipicolinate reductase n=8 Tax=Bifidobacterium longum RepID=D6D9P5_BIFLN
dihydrodipicolinate reductase
L3_063_368G1_scaffold_247_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22178..23497)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DTD0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98399.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_063_368G1_scaffold_247_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23709..27740)
DNA (4032bp) protein (1344aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) (EC:3.6.1.-)
UvrD/REP helicase N-terminal domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASN4_BIFLN
L3_063_368G1_scaffold_247_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27737..32017)
DNA (4281bp) protein (1427aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GUV2_BIFLN
Nuclease {ECO:0000313|EMBL:KEY33176.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L3_063_368G1_scaffold_247_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32149..33570
DNA (1422bp) protein (474aa)
Serine/threonine protein kinase n=13 Tax=Bifidobacterium RepID=B3DTD3_BIFLD
Kinase domain protein {ECO:0000313|EMBL:BAP83117.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
kinase
L3_063_368G1_scaffold_247_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33737..39721
DNA (5985bp) protein (1995aa)
Fibronectin type III domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASX4_BIFLN
Fibronectin type III domain protein {ECO:0000313|EMBL:EIJ32262.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L3_063_368G1_scaffold_247_25
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39732..41105
DNA (1374bp) protein (458aa)
MoxR-like ATPase n=9 Tax=Bifidobacterium RepID=B3DTD5_BIFLD
ATPase AAA
Methanol dehydrogenase regulatory protein homolog {ECO:0000313|EMBL:CCY94888.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_063_368G1_scaffold_247_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41130..42353
DNA (1224bp) protein (408aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G519_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43406.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_063_368G1_scaffold_247_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42350..44863
DNA (2514bp) protein (838aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASE5_BIFLN
Transglutaminase {ECO:0000313|EMBL:KEY33181.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L3_063_368G1_scaffold_247_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44860..45792
DNA (933bp) protein (311aa)
Phosphatase n=10 Tax=Bifidobacterium longum RepID=F8ASE6_BIFLN
phosphatase
Protein phosphatase {ECO:0000313|EMBL:KEY23323.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_063_368G1_scaffold_247_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45819..46334
DNA (516bp) protein (172aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=C5E852_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54250.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_063_368G1_scaffold_247_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46350..46982
DNA (633bp) protein (211aa)
Forkhead domain protein n=14 Tax=Bacteria RepID=E4R014_BIFLM
hypothetical protein
Signal peptide protein {ECO:0000313|EMBL:AIW43402.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying items 1-30 of 64 in total

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