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L3_063_368G1_scaffold_257

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_257_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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201..647
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=4 Tax=Bacteroides RepID=A5ZJE4_9BACE
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDM19774.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
MarR family transcriptional regulator
L3_063_368G1_scaffold_257_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

788..964
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZJE3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM19773.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_063_368G1_scaffold_257_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1043..1744)
DNA (702bp) protein (234aa)
Two-component system response regulator n=8 Tax=Bacteroides RepID=Q8A5S3_BACTN
two-component system response regulator
Transcriptional regulatory protein rprY {ECO:0000313|EMBL:EIY16969.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_063_368G1_scaffold_257_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1746..3293)
DNA (1548bp) protein (516aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJE0_9BACE
two-component system sensor histidine kinase
L3_063_368G1_scaffold_257_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3559..5727)
DNA (2169bp) protein (723aa)
Translation elongation factor G n=2 Tax=Bacteroides caccae RepID=A5ZJD9_9BACE
Translation elongation factor G {ECO:0000313|EMBL:EDM19769.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
fusA; elongation factor G
L3_063_368G1_scaffold_257_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5902..7032
DNA (1131bp) protein (377aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PKI8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16966.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_063_368G1_scaffold_257_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7052..7612
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Bacteroides RepID=I8URZ0_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ74273.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L3_063_368G1_scaffold_257_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7715..8605
DNA (891bp) protein (297aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9EAQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74272.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Fe2+-dicitrate sensor, membrane component
L3_063_368G1_scaffold_257_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8602..11286
DNA (2685bp) protein (895aa)
TonB-dependent receptor n=3 Tax=root RepID=A5ZJD5_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EDM19765.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_063_368G1_scaffold_257_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11289..12329
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZJD4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74269.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_063_368G1_scaffold_257_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12271..12948)
DNA (678bp) protein (226aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PKI5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74268.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ABC transporter ATP-binding protein
L3_063_368G1_scaffold_257_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12927..13232)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74267.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_063_368G1_scaffold_257_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13422..13709
DNA (288bp) protein (96aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJD0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74266.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_063_368G1_scaffold_257_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13706..14314
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJC9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16958.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_257_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14478..15536)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U818_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74263.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Smr domain./Domain of unknown function (DUF2027).
L3_063_368G1_scaffold_257_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15570..15695
DNA (126bp) protein (42aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PKI3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74262.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_063_368G1_scaffold_257_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15721..16413
DNA (693bp) protein (231aa)
Haloacid dehalogenase-like hydrolase n=3 Tax=Bacteroides RepID=A5ZJC7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74261.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted hydrolase (HAD superfamily)
L3_063_368G1_scaffold_257_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16449..17507)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EAQ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16954.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_257_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17641..18873
DNA (1233bp) protein (411aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=3 Tax=Bacteroides RepID=A5ZJC5_9BACE
L3_063_368G1_scaffold_257_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19463..22576
DNA (3114bp) protein (1038aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UVD1_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY16952.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative outer membrane protein
L3_063_368G1_scaffold_257_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22599..24569
DNA (1971bp) protein (657aa)
SusD family protein n=2 Tax=Bacteroides caccae RepID=A5ZJC2_9BACE
SusD family protein {ECO:0000313|EMBL:EDM19752.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_063_368G1_scaffold_257_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24718..25848)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZJC1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19751.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_063_368G1_scaffold_257_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25868..26869)
DNA (1002bp) protein (334aa)
Peptidase M28 family n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U885_9BACE
Peptidase M28 family {ECO:0000313|EMBL:CCZ74255.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
aminopeptidase
L3_063_368G1_scaffold_257_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26966..28087)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UEZ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74254.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
internalin-like protein
L3_063_368G1_scaffold_257_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28199..28615
DNA (417bp) protein (139aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16947.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_257_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28612..29421
DNA (810bp) protein (270aa)
ABC 3 transport family protein n=2 Tax=Bacteroides RepID=A5ZJB7_9BACE
ABC 3 transport family protein {ECO:0000313|EMBL:CCZ74252.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Zinc ABC transporter permease
L3_063_368G1_scaffold_257_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29436..29849
DNA (414bp) protein (138aa)
Hydrolase, P-loop family n=3 Tax=Bacteroides RepID=A5ZJB6_9BACE
Hydrolase, P-loop family {ECO:0000313|EMBL:EDM19746.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATPase/GTPase
L3_063_368G1_scaffold_257_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29846..30100
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZJB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM19745.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_063_368G1_scaffold_257_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30060..31370)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PKZ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74249.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_063_368G1_scaffold_257_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31446..32420)
DNA (975bp) protein (325aa)
MoxR-like ATPases (EC:3.6.3.-)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U805_9BACE
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CCZ74248.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Displaying items 1-30 of 78 in total

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