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L3_063_368G1_scaffold_286

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_286_1
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1453)
DNA (1452bp) protein (484aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Cell wall hydrolase/autolysin n=1 Tax=Clostridium sp. CAG:505 RepID=R7AMY5_9CLOT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:CDD62168.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_063_368G1_scaffold_286_2
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1665..4058)
DNA (2394bp) protein (798aa)
Putative ATP-dependent protease n=1 Tax=Clostridium sp. CAG:505 RepID=R7BBN3_9CLOT
Putative ATP-dependent protease {ECO:0000313|EMBL:CDD62167.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
putative ATP-dependent protease
L3_063_368G1_scaffold_286_3
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4117..4581)
DNA (465bp) protein (155aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAG4_9CLOT
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDD62166.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
ribosomal-protein-alanine acetyltransferase
L3_063_368G1_scaffold_286_4
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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comp(4574..5290)
DNA (717bp) protein (239aa)
Glycoprotease n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKH2_9FIRM
Glycoprotease {ECO:0000313|EMBL:CDC24858.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L3_063_368G1_scaffold_286_5
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(5287..5727)
DNA (441bp) protein (147aa)
Hydrolase P-loop family n=2 Tax=Firmicutes RepID=R6PVS2_9FIRM
Hydrolase P-loop family {ECO:0000313|EMBL:CDC24859.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
conserved hypothetical nucleotide-binding protein
L3_063_368G1_scaffold_286_6
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5748..7691)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AMY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62163.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_063_368G1_scaffold_286_7
unknown

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comp(7712..8053)
DNA (342bp) protein (114aa)

This feature has no annotations

L3_063_368G1_scaffold_286_8
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8195..9325
DNA (1131bp) protein (377aa)
Peptidase M23 n=1 Tax=Clostridium sp. CAG:505 RepID=R7B9U6_9CLOT
Peptidase M23 {ECO:0000313|EMBL:CDD62162.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
M24/M37 family peptidase
L3_063_368G1_scaffold_286_9
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

9599..10297
DNA (699bp) protein (233aa)
DNA-binding response regulator n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKH7_9FIRM
DNA-binding response regulator {ECO:0000313|EMBL:CDC24863.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
two-component system signal transduction response regulator
L3_063_368G1_scaffold_286_10
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10294..12228
DNA (1935bp) protein (645aa)
Histidine kinase A domain protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAF9_9CLOT
Histidine kinase A domain protein {ECO:0000313|EMBL:CDD62160.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
histidine kinase
L3_063_368G1_scaffold_286_11
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

12972..14171
DNA (1200bp) protein (400aa)
aspartate aminotransferase (EC:2.6.1.1)
Aminotransferase class I and II n=2 Tax=Firmicutes RepID=R6PMT2_9FIRM
Aminotransferase class I and II {ECO:0000313|EMBL:CDC24865.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_063_368G1_scaffold_286_12
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(14504..15013)
DNA (510bp) protein (170aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QSF0_9FIRM
tRNA/rRNA methyltransferase SpoU
L3_063_368G1_scaffold_286_13
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15159..15584
DNA (426bp) protein (142aa)
Fe2+/Zn2+ uptake regulation proteins n=2 Tax=Firmicutes RepID=R6Q2C3_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CDD62158.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Fe2+/Zn2+ uptake regulation protein
L3_063_368G1_scaffold_286_14
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(15652..16932)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PVT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24874.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_063_368G1_scaffold_286_15
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(16935..17468)
DNA (534bp) protein (178aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q2C8_9FIRM
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDC24876.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_063_368G1_scaffold_286_16
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

17645..17977
DNA (333bp) protein (111aa)
Transcriptional regulator PadR family n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QSG0_9FIRM
Transcriptional regulator PadR family {ECO:0000313|EMBL:CDC24877.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
PadR family transcriptional regulator
L3_063_368G1_scaffold_286_17
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

17997..19202
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24878.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_063_368G1_scaffold_286_18
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

19219..20355
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PMV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24880.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_063_368G1_scaffold_286_19
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20586..21269)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B9P9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62152.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
transcriptional regulator, GntR family
L3_063_368G1_scaffold_286_20
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21250..22167)
DNA (918bp) protein (306aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B9H7_9CLOT
L3_063_368G1_scaffold_286_21
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(22491..23717)
DNA (1227bp) protein (409aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Aspartokinase n=2 Tax=Firmicutes RepID=R6QSH1_9FIRM
aspartate kinase
L3_063_368G1_scaffold_286_22
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23717..24637)
DNA (921bp) protein (307aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Homoserine kinase n=1 Tax=Clostridium sp. CAG:505 RepID=R7BBL9_9CLOT
homoserine kinase
L3_063_368G1_scaffold_286_23
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(24763..25206)
DNA (444bp) protein (148aa)
UPF0735 ACT domain-containing protein BN668_01539 n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKK6_9FIRM
UPF0735 ACT domain-containing protein BN668_01539 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
amino acid-binding ACT domain-containing protein
L3_063_368G1_scaffold_286_24
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25494..27050
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62147.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_063_368G1_scaffold_286_25
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

27089..28195
DNA (1107bp) protein (369aa)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:2.6.1.9)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24898.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_063_368G1_scaffold_286_26
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28272..28697
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6PMX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD62145.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_063_368G1_scaffold_286_27
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28675..29595
DNA (921bp) protein (307aa)
Conserved hypothetical radical SAM protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B9T2_9CLOT
Conserved hypothetical radical SAM protein {ECO:0000313|EMBL:CDD62144.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
radical SAM protein
L3_063_368G1_scaffold_286_28
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29696..30307
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QSI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD62143.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_063_368G1_scaffold_286_29
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

30495..30989
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24903.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_063_368G1_scaffold_286_30
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

30994..31731
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PVW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24904.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
amidohydrolase 2
Displaying items 1-30 of 74 in total

View Taxonomy