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L3_063_368G1_scaffold_319

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_319_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(97..1017)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IED3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40425.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_063_368G1_scaffold_319_2
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(1039..2331)
DNA (1293bp) protein (431aa)
Aluminium resistance family protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LYV5_9FIRM
Aluminium resistance family protein {ECO:0000313|EMBL:CDB87326.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
aluminium resistance family protein
L3_063_368G1_scaffold_319_3
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(2328..2576)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87327.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
AbrB family transcriptional regulator
L3_063_368G1_scaffold_319_4
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(3232..4524)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HZG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB31217.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
peptidase S1/S6
L3_063_368G1_scaffold_319_5
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(4559..5983)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZ02_9FIRM
L3_063_368G1_scaffold_319_6
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(5987..6670)
DNA (684bp) protein (228aa)
DNA-binding response regulator SrrA n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ET39_9FIRM
DNA-binding response regulator SrrA {ECO:0000313|EMBL:CCX91196.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
OmpR family two-component response regulator
L3_063_368G1_scaffold_319_7
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(7501..7731)
DNA (231bp) protein (77aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ERF9_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CCX93934.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_063_368G1_scaffold_319_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7697..7945)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45717.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_063_368G1_scaffold_319_9
unknown

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comp(7942..8100)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_063_368G1_scaffold_319_10
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

8344..8850
DNA (507bp) protein (169aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6V5_9FIRM
CMP/dCMP deaminase zinc-binding protein
L3_063_368G1_scaffold_319_11
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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8847..9257
DNA (411bp) protein (137aa)
Predicted integral membrane protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AW51_9FIRM
Predicted integral membrane protein {ECO:0000313|EMBL:CCX46194.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Predicted integral membrane protein
L3_063_368G1_scaffold_319_12
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists


9345..11306
DNA (1962bp) protein (654aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EQ30_9FIRM
L3_063_368G1_scaffold_319_13
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

11978..13621
DNA (1644bp) protein (548aa)
Glutamate--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAB1_9FIRM
Glutamate--tRNA ligase {ECO:0000313|EMBL:CDB30874.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
L3_063_368G1_scaffold_319_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13624..14262
DNA (639bp) protein (213aa)
Chloramphenicol O-acetyltransferase n=2 Tax=Oscillibacter RepID=U2R4L4_9FIRM
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:ERK65594.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
chloramphenicol acetyltransferase
L3_063_368G1_scaffold_319_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14259..14819
DNA (561bp) protein (187aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Clostridium sp. CAG:43 RepID=R7B3Y1_9CLOT
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CDD58926.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_063_368G1_scaffold_319_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15381..16757)
DNA (1377bp) protein (459aa)
Transcriptional regulator with HTH domain and aminotransferase domain n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GNU6_9FIRM
Transcriptional regulator with HTH domain and aminotransferase domain {ECO:0000313|EMBL:CDB27118.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative GntR family transcriptional regulator
L3_063_368G1_scaffold_319_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16867..17412
DNA (546bp) protein (182aa)
Predicted membrane protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0V7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDB27116.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Predicted membrane protein
L3_063_368G1_scaffold_319_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

17405..17950
DNA (546bp) protein (182aa)
UPF0340 protein Fisuc_3075 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SP36_9FIRM
UPF0340 protein BN483_00356 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
conserved hypothetical protein TIGR01440
L3_063_368G1_scaffold_319_19
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(18001..18423)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EGT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91905.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_063_368G1_scaffold_319_20
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(18425..19489)
DNA (1065bp) protein (355aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ddl; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZE4_9FIRM
L3_063_368G1_scaffold_319_21
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

19700..20107
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87497.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_063_368G1_scaffold_319_22
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(20551..21972)
DNA (1422bp) protein (474aa)
Putative permease n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQR9_9FIRM
Putative permease {ECO:0000313|EMBL:CDB88177.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
xanthine/uracil/vitamin C permease
L3_063_368G1_scaffold_319_23
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22317..23276)
DNA (960bp) protein (320aa)
Dehydrogenase n=1 Tax=Bacillus sp. HYC-10 RepID=K2NQ31_9BACI
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:KFN05685.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
oxidoreductase
L3_063_368G1_scaffold_319_24
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23278..24078)
DNA (801bp) protein (267aa)
Amidohydrolase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DXB7_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDA88941.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Predicted metal-dependent hydrolase of the TIM-barrel fold
L3_063_368G1_scaffold_319_25
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(24078..25484)
DNA (1407bp) protein (469aa)
pepD; Xaa-His dipeptidase (EC:3.4.13.3)
Putative aminoacyl-histidine dipeptidase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GZD0_9FIRM
Putative aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:CDB30843.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_063_368G1_scaffold_319_26
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

25629..25922
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LM24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86920.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_063_368G1_scaffold_319_27
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25903..26583
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UG38_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU21065.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_063_368G1_scaffold_319_28
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(26629..27756)
DNA (1128bp) protein (376aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GV25_9FIRM
N-acetylglucosamine-6-phosphate deacetylase
L3_063_368G1_scaffold_319_29
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(27779..29167)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H5Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29324.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_063_368G1_scaffold_319_30
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(29177..30325)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5II11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41803.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Phosphotransferase enzyme family.
Displaying items 1-30 of 60 in total

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