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L3_063_368G1_scaffold_336

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_336_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

375..806
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76177.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_336_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1135..1602
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76176.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_336_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1622..1990
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77392.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative effector of murein hydrolase LrgA
L3_063_368G1_scaffold_336_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1987..2679
DNA (693bp) protein (231aa)
LrgB family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHF4_9FIRM
LrgB family protein {ECO:0000313|EMBL:CDD77390.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LrgB family protein
L3_063_368G1_scaffold_336_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2923..3147
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76173.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_336_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3419..4387
DNA (969bp) protein (323aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-(Acetyl-CoA carboxylase) ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHF1_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_063_368G1_scaffold_336_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4451..5215)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76170.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_336_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5220..5714)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77381.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_063_368G1_scaffold_336_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5715..6221)
DNA (507bp) protein (169aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFI5_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_063_368G1_scaffold_336_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6652..7842
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76167.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Alanyl-tRNA synthetase
L3_063_368G1_scaffold_336_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7982..8860
DNA (879bp) protein (293aa)
Amidohydrolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP58_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDD80039.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Imidazolonepropionase and related amidohydrolases
L3_063_368G1_scaffold_336_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9044..10222)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76165.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_336_13
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10284..10481)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7GU03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE30218.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L3_063_368G1_scaffold_336_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10952..11512
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76162.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Protein of unknown function (DUF1393).
L3_063_368G1_scaffold_336_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11847..12623)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFH8_9FIRM
Acetyltransferase {ECO:0000313|EMBL:CDD75930.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Acetyltransferases
L3_063_368G1_scaffold_336_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12724..13422)
DNA (699bp) protein (233aa)
Lipase/acylhydrolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CCV7_9FIRM
Lipase/acylhydrolase {ECO:0000313|EMBL:CDD75931.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Lysophospholipase L1 and related esterases
L3_063_368G1_scaffold_336_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13854..14516
DNA (663bp) protein (221aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=2 Tax=Ruminococcus RepID=C6JFH6_9FIRM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_063_368G1_scaffold_336_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14778..14996
DNA (219bp) protein (73aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0, C subunit n=2 Tax=Ruminococcus RepID=C6JFH5_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_063_368G1_scaffold_336_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15036..15536
DNA (501bp) protein (167aa)
ATP synthase subunit b n=2 Tax=Ruminococcus RepID=C6JFH4_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATP synthase F0 subunit B
L3_063_368G1_scaffold_336_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15517..16020
DNA (504bp) protein (168aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDB3_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_063_368G1_scaffold_336_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16028..17536
DNA (1509bp) protein (503aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP synthase subunit alpha n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CCW2_9FIRM
ATP synthase F1 subunit alpha
L3_063_368G1_scaffold_336_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17545..18435
DNA (891bp) protein (297aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFH1_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_063_368G1_scaffold_336_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18441..19838
DNA (1398bp) protein (466aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=2 Tax=Ruminococcus RepID=C6JFH0_9FIRM
L3_063_368G1_scaffold_336_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19851..20264
DNA (414bp) protein (138aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=2 Tax=Ruminococcus RepID=C6JFG9_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_063_368G1_scaffold_336_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20376..21887)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75942.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator
L3_063_368G1_scaffold_336_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22010..22987)
DNA (978bp) protein (326aa)
Penicillin V acylase and related amidases (EC:3.5.1.24)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75944.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_063_368G1_scaffold_336_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23257..25611
DNA (2355bp) protein (785aa)
yicI; Alpha-xylosidase (EC:3.2.1.177)
Glycoside hydrolase family 31 protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CCX2_9FIRM
Glycoside hydrolase family 31 protein {ECO:0000313|EMBL:CDD75946.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_063_368G1_scaffold_336_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25912..26472
DNA (561bp) protein (187aa)
Type IV leader peptidase family. (EC:3.4.23.43)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CF41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75948.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_063_368G1_scaffold_336_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26469..27494
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75950.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_063_368G1_scaffold_336_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27530..28720
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFG2_9FIRM
Type II secretion system protein E {ECO:0000313|EMBL:CDD75952.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
type II secretion system protein E
Displaying items 1-30 of 80 in total

View Taxonomy