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L3_063_368G1_scaffold_371

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Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_371_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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965..1210
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LX89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM99177.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_063_368G1_scaffold_371_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1414..2247
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80493.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
SpoIID/LytB domain
L3_063_368G1_scaffold_371_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2309..3202
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75795.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Membrane proteins related to metalloendopeptidases
L3_063_368G1_scaffold_371_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3460..4452
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80495.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LacI family transcriptional regulator
L3_063_368G1_scaffold_371_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4874..6778
DNA (1905bp) protein (635aa)
PTS system glucose subfamily IIA component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRC9_9FIRM
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CDD80496.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
PTS system, glucose subfamily, IIA component
L3_063_368G1_scaffold_371_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6775..8214
DNA (1440bp) protein (480aa)
sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CS68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80497.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_063_368G1_scaffold_371_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8497..8742
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80498.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted endonuclease containing a URI domain
L3_063_368G1_scaffold_371_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8771..9742
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80499.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transglutaminase-like superfamily.
L3_063_368G1_scaffold_371_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9863..10525)
DNA (663bp) protein (221aa)
Hemolysin III family channel protein n=2 Tax=Ruminococcus RepID=C6JGY5_9FIRM
Hemolysin III family channel protein {ECO:0000313|EMBL:EES75789.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
channel protein, hemolysin III family
L3_063_368G1_scaffold_371_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10775..11563
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80501.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPases involved in chromosome partitioning
L3_063_368G1_scaffold_371_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11554..11739
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75787.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_063_368G1_scaffold_371_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11791..12825
DNA (1035bp) protein (345aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQI4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD80504.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LacI family transcriptional regulator
L3_063_368G1_scaffold_371_13
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13225..14490
DNA (1266bp) protein (422aa)
ABC transporter substrate-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D4C181
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EET62644.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
family 1 extracellular solute-binding protein
L3_063_368G1_scaffold_371_14
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14628..16088
DNA (1461bp) protein (487aa)
sugar ABC transporter permease n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000317F46D
ABC transporter, permease protein {ECO:0000313|EMBL:EET62642.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_063_368G1_scaffold_371_15
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16088..16942
DNA (855bp) protein (285aa)
sugar ABC transporter permease n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FE7E4D
ABC transporter, permease protein {ECO:0000313|EMBL:EET62641.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC transporter permease
L3_063_368G1_scaffold_371_16
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16947..17723
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E7F7A3
Uncharacterized protein {ECO:0000313|EMBL:EET62637.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
TraX protein.
L3_063_368G1_scaffold_371_17
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17931..18578
DNA (648bp) protein (216aa)
Resolvase, N-terminal domain protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7A1_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDR46609.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
DNA invertase
L3_063_368G1_scaffold_371_18
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18541..19695
DNA (1155bp) protein (385aa)
Transposase, IS605 OrfB family n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7A0_9FIRM
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EDR46608.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
putative transposase
L3_063_368G1_scaffold_371_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19846..21915
DNA (2070bp) protein (690aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGY1_9FIRM
L3_063_368G1_scaffold_371_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22056..25490
DNA (3435bp) protein (1145aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75784.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_371_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25647..26195
DNA (549bp) protein (183aa)
stage V sporulation protein T n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003056902
Uncharacterized protein {ECO:0000313|EMBL:CDD79780.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, AbrB family
L3_063_368G1_scaffold_371_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26333..27535
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76996.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted phosphohydrolases
L3_063_368G1_scaffold_371_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27631..29094)
DNA (1464bp) protein (488aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGX0_9FIRM
L3_063_368G1_scaffold_371_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29712..30968
DNA (1257bp) protein (419aa)
N-acyl-D-glucosamine 2-epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI51_9FIRM
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:CDD76998.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
N-acyl-D-glucosamine 2-epimerase
L3_063_368G1_scaffold_371_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31086..31436)
DNA (351bp) protein (117aa)
Sodium:alanine symporter family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFJ9_9FIRM
Sodium:alanine symporter family protein {ECO:0000313|EMBL:CDD76999.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amino acid carrier protein
L3_063_368G1_scaffold_371_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31500..32144)
DNA (645bp) protein (215aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77000.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_063_368G1_scaffold_371_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32800..33495
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75777.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_063_368G1_scaffold_371_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33580..36252
DNA (2673bp) protein (891aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D50A85
Uncharacterized protein {ECO:0000313|EMBL:EES75776.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Signal transduction histidine kinase
L3_063_368G1_scaffold_371_29
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36356..38284)
DNA (1929bp) protein (643aa)
Putative ribokinase n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C041_9CLOT
Putative ribokinase {ECO:0000313|EMBL:EEG74769.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ribokinase
L3_063_368G1_scaffold_371_30
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38684..39847
DNA (1164bp) protein (388aa)
Creatinase n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C039_9CLOT
Creatinase {ECO:0000313|EMBL:EEG74767.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
peptidase M24
Displaying items 1-30 of 60 in total

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