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L3_063_368G1_scaffold_374

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_374_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(131..739)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41924.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_063_368G1_scaffold_374_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(749..2674)
DNA (1926bp) protein (642aa)
Uncharacterized metal-binding protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IIC1_9FIRM
Uncharacterized metal-binding protein {ECO:0000313|EMBL:CCY41923.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Uncharacterized metal-binding protein
L3_063_368G1_scaffold_374_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3344..4912)
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T458_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97503.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_063_368G1_scaffold_374_4
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5099..5428)
DNA (330bp) protein (110aa)
Cupin domain protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QUT0_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDC39590.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
Cupin domain.
L3_063_368G1_scaffold_374_5
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(6216..8345)
DNA (2130bp) protein (710aa)
acsB2; CO dehydrogenase/acetyl-CoA synthase complex, beta subunit AcsB2 (EC:1.2.99.2)
CO dehydrogenase/acetyl-CoA synthase complex beta subunit AcsB2 n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EI17_9FIRM
CO dehydrogenase/acetyl-CoA synthase complex beta subunit AcsB2 {ECO:0000313|EMBL:CCX90944.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_063_368G1_scaffold_374_6
unknown

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comp(8452..9009)
DNA (558bp) protein (186aa)

This feature has no annotations

L3_063_368G1_scaffold_374_7
unknown

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9249..9452
DNA (204bp) protein (68aa)

This feature has no annotations

L3_063_368G1_scaffold_374_8
unknown

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comp(9438..10082)
DNA (645bp) protein (215aa)

This feature has no annotations

L3_063_368G1_scaffold_374_9
unknown

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comp(10108..10764)
DNA (657bp) protein (219aa)

This feature has no annotations

L3_063_368G1_scaffold_374_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(11447..13723)
DNA (2277bp) protein (759aa)
acetyl-CoA decarbonylase/synthase gamma subunit (EC:1.2.99.2 2.1.1.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J157_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42672.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_063_368G1_scaffold_374_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(13743..14687)
DNA (945bp) protein (315aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) (EC:1.2.99.2)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LKT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88048.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_063_368G1_scaffold_374_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(14828..15595)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29145.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
CO dehydrogenase maturation factor
L3_063_368G1_scaffold_374_13
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(15757..16686)
DNA (930bp) protein (310aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H5F9_9FIRM
L3_063_368G1_scaffold_374_14
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17659..18927
DNA (1269bp) protein (423aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
aspartyl aminopeptidase (EC:3.4.11.21)
M18 family aminopeptidase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AIZ7_9CLOT
L3_063_368G1_scaffold_374_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19658..20134)
DNA (477bp) protein (159aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3V1_9CLOT
YbaK / prolyl-tRNA synthetases associated domain-containing protein
L3_063_368G1_scaffold_374_16
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20213..20839
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37A87
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L3_063_368G1_scaffold_374_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20836..21702
DNA (867bp) protein (289aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. D5 RepID=F0Z0Z8_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGB92100.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
AraC family transcriptional regulator
L3_063_368G1_scaffold_374_18
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(22504..23859)
DNA (1356bp) protein (452aa)
putative RNA methyltransferase CTC_02481 (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6ML82_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDB86582.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_063_368G1_scaffold_374_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

24682..25572
DNA (891bp) protein (297aa)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins (EC:1.97.1.4)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41437.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_063_368G1_scaffold_374_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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25723..26301
DNA (579bp) protein (193aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IMA2_9FIRM
L3_063_368G1_scaffold_374_21
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26639..26986)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R336_CLOB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC91406.1}; TaxID=699246 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" source="Mageeibacillus indolicus (strain UPII9-5) (Clostridiales genomosp.; BVAB3 (strain UPII9-5)).;"
L3_063_368G1_scaffold_374_22
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26998..27507)
DNA (510bp) protein (170aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R337_CLOB3
GNAT family acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ADC90393.1}; TaxID=699246 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" source="Mageeibacillus indolicus (strain UPII9-5) (Clostridiales genomosp.; BVAB3 (strain UPII9-5)).;"
L3_063_368G1_scaffold_374_23
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27504..28304)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J9G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT24378.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
metW; methionine biosynthesis protein MetW
L3_063_368G1_scaffold_374_24
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28328..28948)
DNA (621bp) protein (207aa)
Phosphoglycerate mutase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LY70_CLOB8
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ABR35300.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_063_368G1_scaffold_374_25
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29010..29255)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q092_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERK49766.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_063_368G1_scaffold_374_26
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(30305..31369)
DNA (1065bp) protein (355aa)
Sporulation integral membrane protein YtvI n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LJU4_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CDB87733.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
sporulation integral membrane protein YtvI
L3_063_368G1_scaffold_374_27
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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31489..31929
DNA (441bp) protein (147aa)
UPF0735 ACT domain-containing protein BN490_00183 n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAL3_9FIRM
UPF0735 ACT domain-containing protein BN490_00183 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_063_368G1_scaffold_374_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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32048..32275
DNA (228bp) protein (76aa)
Acyl carrier protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWZ3_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
acyl carrier protein
L3_063_368G1_scaffold_374_29
unknown

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comp(32864..33265)
DNA (402bp) protein (134aa)

This feature has no annotations

L3_063_368G1_scaffold_374_30
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(33360..33815)
DNA (456bp) protein (152aa)
Large-conductance mechanosensitive channel n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EZ97_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
mscL; large-conductance mechanosensitive channel
Displaying items 1-30 of 60 in total

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