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L3_063_368G1_scaffold_378

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_378_1
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

457..2214
DNA (1758bp) protein (586aa)
Repeat protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CJJ2_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI93325.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
internalin A
L3_063_368G1_scaffold_378_2
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2264..3223)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWQ1_BIFLJ
Putative sugar transferase {ECO:0000313|EMBL:KFI84418.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
glycosyl transferase, family 2
L3_063_368G1_scaffold_378_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3433..4641)
DNA (1209bp) protein (403aa)
Putative cell wall binding repeat 2 {ECO:0000313|EMBL:KFI42180.1}; EC=3.5.1.28 {ECO:0000313|EMBL:KFI42180.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Putative cell wall binding repeat 2 n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DRL7_BIFBI
cell wall binding repeat containing protein
L3_063_368G1_scaffold_378_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4750..6030)
DNA (1281bp) protein (427aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium RepID=D6ZWQ5_BIFLJ
Sugar ABC transporter {ECO:0000313|EMBL:KEY20674.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
sugar ABC transporter
L3_063_368G1_scaffold_378_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6030..6863)
DNA (834bp) protein (278aa)
ABC-2 type transporter n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7B1_BIFAD
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
ABC transporter
L3_063_368G1_scaffold_378_6
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6973..8181)
DNA (1209bp) protein (403aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Collinsella sp. CAG:289 RepID=R7DB68_9ACTN
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDD86652.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
capsular polysaccharide biosynthsis protein
L3_063_368G1_scaffold_378_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8344..9462
DNA (1119bp) protein (373aa)
Putative membrane protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEY20672.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein with acyltransferase family domain
L3_063_368G1_scaffold_378_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9495..11459
DNA (1965bp) protein (655aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SB19_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB10416.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_063_368G1_scaffold_378_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11675..13543
DNA (1869bp) protein (623aa)
Glycosyltransferase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BH37_9FIRM
Glycosyl transferase {ECO:0000313|EMBL:KEY20670.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
glycosyl transferase
L3_063_368G1_scaffold_378_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13546..14484
DNA (939bp) protein (313aa)
Glycosyltransferase group 2 family protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDA1_9FIRM
Glycosyl transferase {ECO:0000313|EMBL:KEY20669.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
glycosyltransferase, group 2 family protein
L3_063_368G1_scaffold_378_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14589..16718)
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7N2_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24069.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_063_368G1_scaffold_378_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16745..17224
DNA (480bp) protein (160aa)
PF03629 domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AW91_BIFLN
PF03629 domain protein {ECO:0000313|EMBL:EIJ23384.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_063_368G1_scaffold_378_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17269..17907
DNA (639bp) protein (213aa)
PF03629 domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AW91_BIFLN
PF03629 domain protein {ECO:0000313|EMBL:EIJ23384.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_063_368G1_scaffold_378_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17975..19234
DNA (1260bp) protein (420aa)
Nucleotide sugar dehydrogenase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I3Y1_BIFLN
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KEY20666.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
udp-glucose/gdp-mannose dehydrogenase
L3_063_368G1_scaffold_378_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19320..20429)
DNA (1110bp) protein (370aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARK8_BIFLN
dTDP-glucose 4,6-dehydratase
L3_063_368G1_scaffold_378_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20671..21108
DNA (438bp) protein (146aa)
Excisionase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARK9_BIFLN
excisionase
Excisionase {ECO:0000313|EMBL:AEI96640.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_063_368G1_scaffold_378_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21161..21865
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARL0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI96641.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_063_368G1_scaffold_378_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21964..23667
DNA (1704bp) protein (568aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARL1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:AEI96642.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
hypothetical protein
L3_063_368G1_scaffold_378_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23742..24410
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARL2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI96643.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_063_368G1_scaffold_378_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24562..25740
DNA (1179bp) protein (393aa)
UDP-galactopyranose mutase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPG5_BIFLD
glf; UDP-galactopyranose mutase
UDP-galactopyranose mutase {ECO:0000313|EMBL:ACD99024.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_063_368G1_scaffold_378_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25961..27172
DNA (1212bp) protein (404aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=C5EDG7_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ56061.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_063_368G1_scaffold_378_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27275..28096
DNA (822bp) protein (274aa)
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase in the fumarylacetoacetate hydrolase family n=11 Tax=Bifidobacterium RepID=Q8G4X7_BIFLO
mhpD; mhpd
FAH family protein {ECO:0000313|EMBL:EIJ23400.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_063_368G1_scaffold_378_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28169..28345)
DNA (177bp) protein (59aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DPG8_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ29339.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_063_368G1_scaffold_378_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28342..29217)
DNA (876bp) protein (292aa)
Regulatory protein, IclR n=9 Tax=Bifidobacterium RepID=D6ZWN2_BIFLJ
transcriptional regulator
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:EIJ29314.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_063_368G1_scaffold_378_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29463..31016
DNA (1554bp) protein (518aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Histidine ammonia-lyase n=10 Tax=Bifidobacterium longum RepID=D6DCG5_BIFLN
histidine ammonia-lyase
L3_063_368G1_scaffold_378_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31235..33904
DNA (2670bp) protein (890aa)
Chaperone protein ClpB n=12 Tax=Bifidobacterium longum RepID=CLPB_BIFLO
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Clp protease
L3_063_368G1_scaffold_378_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34051..35160
DNA (1110bp) protein (370aa)
GltX2 n=9 Tax=Bacteria RepID=E4R2H8_BIFLM
gltX2; gltx2
Putative glutamyl-queuosine tRNA(Asp) synthetase {ECO:0000313|EMBL:EIJ23374.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_063_368G1_scaffold_378_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35186..36295
DNA (1110bp) protein (370aa)
Glycerophosphoryl diester phosphodiesterase n=9 Tax=Bifidobacterium longum RepID=D6ZWM8_BIFLJ
phosphodiesterase
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EEI80402.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_063_368G1_scaffold_378_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36491..36970)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Ribosomal RNA large subunit methyltransferase H n=19 Tax=Bifidobacterium RepID=RLMH_BIFLD
hypothetical protein
L3_063_368G1_scaffold_378_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37018..37659)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Uracil phosphoribosyltransferase n=7 Tax=Bifidobacterium RepID=UPP_BIFLD
upp; uracil phosphoribosyltransferase
Displaying items 1-30 of 64 in total

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