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L3_063_368G1_scaffold_435

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_435_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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106..948
DNA (843bp) protein (281aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0NF45_CLOSV
ABC transporter, permease protein {ECO:0000313|EMBL:EDS06805.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
sugar ABC transporter permease
L3_063_368G1_scaffold_435_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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996..2321
DNA (1326bp) protein (442aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF44_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35871.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_368G1_scaffold_435_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2353..3912
DNA (1560bp) protein (520aa)
Response regulator receiver domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF43_CLOSV
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS06803.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
AraC family transcriptional regulator
L3_063_368G1_scaffold_435_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4078..4254
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NF42_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35869.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_368G1_scaffold_435_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4305..6728
DNA (2424bp) protein (808aa)
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:EDS06801.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDS06801.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
CRISPR-associated endonuclease Cas3-HD n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF41_CLOSV
CRISPR-associated HD domain-containing protein
L3_063_368G1_scaffold_435_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6744..7484
DNA (741bp) protein (247aa)
CRISPR-associated protein Cas5, Dvulg subtype n=2 Tax=Clostridiales RepID=B0NF40_CLOSV
CRISPR-associated protein Cas5, Dvulg subtype {ECO:0000313|EMBL:EDS06800.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
CRISPR-associated protein, Csd5d family
L3_063_368G1_scaffold_435_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7471..9459
DNA (1989bp) protein (663aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF39_CLOSV
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:EDS06799.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG
L3_063_368G1_scaffold_435_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9456..10313
DNA (858bp) protein (286aa)
Csd2 family CRISPR-associated protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMD6_9FIRM
Csd2 family CRISPR-associated protein {ECO:0000313|EMBL:EGN35864.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG
L3_063_368G1_scaffold_435_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10306..10962
DNA (657bp) protein (219aa)
CRISPR-associated protein cas4 n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMD5_9FIRM
CRISPR-associated protein cas4 {ECO:0000313|EMBL:EGN35863.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
CRISPR-associated protein Cas4
L3_063_368G1_scaffold_435_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10965..11996
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMD4_9FIRM
CRISPR-associated Cas1 family protein
L3_063_368G1_scaffold_435_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12005..12295
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
CRISPR-associated endoribonuclease Cas2 n=2 Tax=Clostridiales RepID=B0NF35_CLOSV
CRISPR-associated endoribonuclease Cas2
L3_063_368G1_scaffold_435_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15354..16001
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35858.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_063_368G1_scaffold_435_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16020..16415
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NF25_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35857.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Polyketide cyclase / dehydrase and lipid transport.
L3_063_368G1_scaffold_435_14
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16444..16650
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35856.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_368G1_scaffold_435_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16647..16988
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NF23_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35855.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_368G1_scaffold_435_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17532..18503
DNA (972bp) protein (324aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridiales RepID=B0NF22_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35854.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
regulatory protein, LysR
L3_063_368G1_scaffold_435_17
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18555..19580
DNA (1026bp) protein (342aa)
Putative xanthine dehydrogenase accessory protein XdhC n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF21_CLOSV
Putative xanthine dehydrogenase accessory protein XdhC {ECO:0000313|EMBL:EDS06781.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
L3_063_368G1_scaffold_435_18
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19610..20635
DNA (1026bp) protein (342aa)
Molybdopterin binding domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF20_CLOSV
Molybdopterin binding domain protein {ECO:0000313|EMBL:EDS06780.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
moeA2; molybdopterin biosynthesis protein MoeA2
L3_063_368G1_scaffold_435_19
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20800..20970
DNA (171bp) protein (57aa)
Molybdenum cofactor biosynthesis protein A family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF19_CLOSV
Molybdenum cofactor biosynthesis protein A family protein {ECO:0000313|EMBL:EDS06779.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
GTP cyclohydrolase subunit MoaA
L3_063_368G1_scaffold_435_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21019..21273
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NF18_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35847.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_368G1_scaffold_435_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21270..22163
DNA (894bp) protein (298aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF17_CLOSV
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EDS06777.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L3_063_368G1_scaffold_435_22
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22191..22895
DNA (705bp) protein (235aa)
Molybdate ABC transporter, permease protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF16_CLOSV
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:EDS06776.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
molybdate ABC transporter, permease protein
L3_063_368G1_scaffold_435_23
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22921..23970
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35844.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ABC-type spermidine/putrescine transport systems, ATPase components
L3_063_368G1_scaffold_435_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24042..24452
DNA (411bp) protein (137aa)
SnoaL-like polyketide cyclase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF14_CLOSV
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:EDS06774.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_063_368G1_scaffold_435_25
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24609..24827
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NF13_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06773.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_063_368G1_scaffold_435_26
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25336..25944
DNA (609bp) protein (203aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF12_CLOSV
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDS06772.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
putative site-specific recombinase
L3_063_368G1_scaffold_435_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26210..27631
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38575.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
cell wall surface anchor family protein
L3_063_368G1_scaffold_435_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27680..28981
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH64_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38574.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_368G1_scaffold_435_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29431..29526)
DNA (96bp) protein (32aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38573.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_368G1_scaffold_435_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29561..29782)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NH67_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38572.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
XRE family transcriptional regulator
Displaying items 1-30 of 63 in total

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