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L3_063_368G1_scaffold_452

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_452_1
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D245_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ02641.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_063_368G1_scaffold_452_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(228..1484)
DNA (1257bp) protein (419aa)
CBS domain protein n=2 Tax=Bacteroides RepID=C3QSV7_9BACE
CBS domain protein {ECO:0000313|EMBL:EFF52582.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Hemolysins and related proteins containing CBS domains
L3_063_368G1_scaffold_452_3
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1488..2141)
DNA (654bp) protein (218aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9JMF5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI37334.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Protein of unknown function (DUF1239).
L3_063_368G1_scaffold_452_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2146..3471)
DNA (1326bp) protein (442aa)
Tetratricopeptide repeat protein n=3 Tax=Bacteroides RepID=C3QSV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY67464.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_063_368G1_scaffold_452_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3530..4843)
DNA (1314bp) protein (438aa)
Outer membrane protein transport protein (OMPP1/FadL/TodX) n=2 Tax=Bacteroides RepID=D4WFP7_BACOV
Outer membrane protein transport protein (OMPP1/FadL/TodX) {ECO:0000313|EMBL:EFF52585.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Outer membrane protein transport protein (OMPP1/FadL/TodX).
L3_063_368G1_scaffold_452_6
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4918..5433)
DNA (516bp) protein (172aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
pantothenate kinase, type III (EC:2.7.1.33)
Type III pantothenate kinase n=6 Tax=Bacteroides RepID=D4VJ13_9BACE
L3_063_368G1_scaffold_452_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5820..7007
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3QSV1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF52587.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_452_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7007..8581
DNA (1575bp) protein (525aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=8 Tax=Bacteroides RepID=A7M500_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN03653.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Type I phosphodiesterase / nucleotide pyrophosphatase.
L3_063_368G1_scaffold_452_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8794..12111
DNA (3318bp) protein (1106aa)
Protein translocase subunit SecA n=2 Tax=Bacteroides RepID=C3QSU9_9BACE
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
protein translocase subunit secA
L3_063_368G1_scaffold_452_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12286..13392
DNA (1107bp) protein (369aa)
Putative lipoprotein n=3 Tax=Bacteroides RepID=D4WFQ2_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN03651.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_063_368G1_scaffold_452_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13454..13900
DNA (447bp) protein (149aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=A7M4Z7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO09330.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_063_368G1_scaffold_452_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14038..16050)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QSU6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY67456.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_063_368G1_scaffold_452_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16050..17318)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C3QSU5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN03648.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_063_368G1_scaffold_452_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17341..19092)
DNA (1752bp) protein (584aa)
Tetratricopeptide repeat protein n=3 Tax=Bacteroides RepID=D4WFQ6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY63426.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
SusD family.
L3_063_368G1_scaffold_452_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19124..22339)
DNA (3216bp) protein (1072aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8YLR8_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY63427.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Outer membrane receptor proteins, mostly Fe transport
L3_063_368G1_scaffold_452_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22452..23486)
DNA (1035bp) protein (345aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides RepID=D4WFQ8_BACOV
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFF52596.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
anti-sigma factor
L3_063_368G1_scaffold_452_17
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23613..24176)
DNA (564bp) protein (188aa)
RNA polymerase sigma-70 factor, expansion family 1 n=6 Tax=Bacteroides RepID=E5C532_9BACE
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI37320.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
RNA polymerase ECF-type sigma factor
L3_063_368G1_scaffold_452_18
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24146..24295)
DNA (150bp) protein (50aa)
RNA polymerase sigma-70 factor, expansion family 1 n=6 Tax=Bacteroides RepID=E5C532_9BACE
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EFS30556.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L3_063_368G1_scaffold_452_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24345..26480)
DNA (2136bp) protein (712aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=3 Tax=Bacteroides RepID=C3QST8_9BACE
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:EFF52598.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
alpha-N-acetylglucosaminidase
L3_063_368G1_scaffold_452_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26548..28881)
DNA (2334bp) protein (778aa)
Beta-galactosidase n=3 Tax=Bacteroides RepID=C3QST7_9BACE
Glycosyl hydrolase family 35 {ECO:0000313|EMBL:EFF52599.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
beta-galactosidase
L3_063_368G1_scaffold_452_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28964..30529)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7M4Y8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO09321.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_063_368G1_scaffold_452_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30558..31868)
DNA (1311bp) protein (437aa)
Fibrobacter succinogene major paralogous domain protein n=4 Tax=Bacteroides RepID=A7M4Y7_BACOV
Conserved domain protein {ECO:0000313|EMBL:EFF52601.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_368G1_scaffold_452_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31884..33398)
DNA (1515bp) protein (505aa)
SusD family protein n=5 Tax=Bacteroides RepID=A7M4Y6_BACOV
SusD family protein {ECO:0000313|EMBL:EDO09319.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
frrH; putative outer membrane protein
L3_063_368G1_scaffold_452_24
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33411..36722)
DNA (3312bp) protein (1104aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C3QST3_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEO55017.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
frrG; putative outer membrane protein
L3_063_368G1_scaffold_452_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36969..37991)
DNA (1023bp) protein (341aa)
Sigma factor regulatory protein, FecR/PupR family n=6 Tax=Bacteroides RepID=C3QST1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY63434.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Fe2+-dicitrate sensor, membrane component
L3_063_368G1_scaffold_452_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38126..38701
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor n=5 Tax=Bacteroides RepID=C3QST0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN03638.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_063_368G1_scaffold_452_27
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39013..40911)
DNA (1899bp) protein (633aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Bacteroides RepID=D4WFR8_BACOV
two-component system sensor histidine kinase
L3_063_368G1_scaffold_452_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(41029..43665)
DNA (2637bp) protein (879aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WFR9_BACOV
L3_063_368G1_scaffold_452_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43732..44370)
DNA (639bp) protein (213aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QSS6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF52608.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_452_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44514..45566
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=2 Tax=Bacteroides ovatus RepID=D4WFS1_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF52609.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
Displaying items 1-30 of 80 in total

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