ggKbase home page

L3_063_368G1_scaffold_465

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_465_1
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QRA5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EGG56360.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
Site-specific recombinase XerD
L3_063_368G1_scaffold_465_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(525..6512)
DNA (5988bp) protein (1996aa)
DNA methylase n=1 Tax=Bacteroides barnesiae RepID=UPI00036894EF
DNA methylase {ECO:0000313|EMBL:KER55738.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
DNA methylase
L3_063_368G1_scaffold_465_3
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6499..6951)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMI7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDU99597.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_063_368G1_scaffold_465_4
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7101..9236)
DNA (2136bp) protein (712aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
DNA topoisomerase n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMI8_9BACE
DNA topoisomerase
L3_063_368G1_scaffold_465_5
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9390..11258)
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMI9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDU99599.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_063_368G1_scaffold_465_6
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11344..11748)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMJ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDU99600.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_063_368G1_scaffold_465_7
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11732..12085)
DNA (354bp) protein (118aa)
DNA binding domain, excisionase family n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMJ1_9BACE
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDU99601.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
DNA binding domain protein, excisionase
L3_063_368G1_scaffold_465_8
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12306..13247)
DNA (942bp) protein (314aa)
ribose phosphate pyrophosphokinase n=1 Tax=Bacteroides barnesiae RepID=UPI00036CEE24
ribose phosphate pyrophosphokinase
Putative ribose phosphate pyrophosphokinase {ECO:0000313|EMBL:ADY35810.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L3_063_368G1_scaffold_465_9
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13422..13835)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMJ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDU99604.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_063_368G1_scaffold_465_10
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14394..15623
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IKT8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68665.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
integrase
L3_063_368G1_scaffold_465_11

Not on your lists

15643..16755
DNA (1113bp) protein (371aa)
Tyrosine type site-specific recombinase n=1 Tax=gut metagenome RepID=J9FFC6_9ZZZZ
Tyrosine type site-specific recombinase {ECO:0000313|EMBL:EJW93123.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
integrase
L3_063_368G1_scaffold_465_12
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16887..18131)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A3G5_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO78095.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_063_368G1_scaffold_465_13
Prevotella sp. CAG:924, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18100..18942)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:924 RepID=R5FF52_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY02264.1}; TaxID=1262938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:924.;"
hypothetical protein
L3_063_368G1_scaffold_465_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19281..19430
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YFN5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21844.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_063_368G1_scaffold_465_15
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19427..19852)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FH40_BACFG
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFA18597.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
integrase
L3_063_368G1_scaffold_465_16
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20018..20290)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EQL5_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII65013.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_063_368G1_scaffold_465_17
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20380..20616)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CGP1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ERM88949.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
hypothetical protein
L3_063_368G1_scaffold_465_18
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20756..21358)
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D1K6Q5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ20261.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
hypothetical protein
L3_063_368G1_scaffold_465_19
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21738..22037)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R1Q5_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY36363.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L3_063_368G1_scaffold_465_20
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22296..22481)
DNA (186bp) protein (62aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D1K6Q3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY36445.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
hypothetical protein
L3_063_368G1_scaffold_465_21
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22848..23903)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QRT5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI39224.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_063_368G1_scaffold_465_22
unknown

Not on your lists

23930..24019
DNA (90bp) protein (30aa)

This feature has no annotations

L3_063_368G1_scaffold_465_23
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24163..25050)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CD11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV04763.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
hypothetical protein
L3_063_368G1_scaffold_465_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25090..26817)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZRB3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14066.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
int; integrase
L3_063_368G1_scaffold_465_25
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27331..28353)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IKU1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68668.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
filamentation induced by cAMP protein fic
L3_063_368G1_scaffold_465_26
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28538..28864)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IKU2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68669.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_063_368G1_scaffold_465_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28876..29202)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZFH2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH19495.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hemoglobin and hemoglobin-haptoglobin-binding protein B
L3_063_368G1_scaffold_465_28
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29621..30181
DNA (561bp) protein (187aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NMU8_BACSE
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDS16195.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
RNA polymerase subunit sigma-70
L3_063_368G1_scaffold_465_29
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30227..30646
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YCX5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH19497.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_063_368G1_scaffold_465_30
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30575..30763)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IKU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68674.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Displaying items 1-30 of 79 in total

View Taxonomy