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L3_063_368G1_scaffold_538

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_538_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

160..2664
DNA (2505bp) protein (835aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Endonuclease MutS2 n=4 Tax=root RepID=A5ZGT1_9BACE
Mismatch repair ATPase (MutS family)
L3_063_368G1_scaffold_538_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2767..3819
DNA (1053bp) protein (351aa)
Magnesium and cobalt transport protein CorA n=3 Tax=Bacteroides RepID=A5ZGT0_9BACE
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Mg2+/Co2+ transport protein
L3_063_368G1_scaffold_538_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3837..5045
DNA (1209bp) protein (403aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EDM20638.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDM20638.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L-serine ammonia-lyase n=3 Tax=Bacteroides RepID=A5ZGS9_9BACE
L-serine dehydratase
L3_063_368G1_scaffold_538_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5162..5665)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGS8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22821.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_538_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5711..6157)
DNA (447bp) protein (149aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGS7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75065.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Protein of unknown function (DUF2874).
L3_063_368G1_scaffold_538_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6420..6968)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGS6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22819.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_538_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7116..10661
DNA (3546bp) protein (1182aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5V2A5_9BACE
two-component system sensor histidine kinase
L3_063_368G1_scaffold_538_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11232..13838
DNA (2607bp) protein (869aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UA53_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75068.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
membrane or secreted protein
L3_063_368G1_scaffold_538_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13908..16883
DNA (2976bp) protein (992aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q175_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY22816.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_538_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16907..18484
DNA (1578bp) protein (526aa)
SusD family protein n=3 Tax=Bacteroides RepID=A5ZGS2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22815.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
SusD family protein
L3_063_368G1_scaffold_538_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18508..20271
DNA (1764bp) protein (588aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGS1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22814.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_538_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20285..21379
DNA (1095bp) protein (365aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Glycosyl hydrolase, family 53 n=2 Tax=Bacteroides caccae RepID=A5ZGS0_9BACE
arabinogalactan endo-1,4-beta-galactosidase
L3_063_368G1_scaffold_538_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21386..22759
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBY3_9BACE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDM20628.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Beta-galactosidase/beta-glucuronidase
L3_063_368G1_scaffold_538_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22705..23826
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBY3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22812.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Beta-galactosidase/beta-glucuronidase
L3_063_368G1_scaffold_538_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23957..24988)
DNA (1032bp) protein (344aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bacteroides RepID=A5ZGR8_9BACE
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EDM20627.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative endonuclease/exonuclease/phosphatase family protein
L3_063_368G1_scaffold_538_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25016..25702)
DNA (687bp) protein (229aa)
TrkA N-terminal domain protein n=3 Tax=Bacteroides RepID=A5ZGR7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22810.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
K+ uptake system protein
L3_063_368G1_scaffold_538_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25707..27536)
DNA (1830bp) protein (610aa)
Cation transport protein n=3 Tax=Bacteroides RepID=A5ZGR6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75076.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
K+ uptake protein
L3_063_368G1_scaffold_538_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27671..29041
DNA (1371bp) protein (457aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Pyridoxal-phosphate dependent TrpB-like enzyme n=3 Tax=Bacteroides RepID=A5ZGR5_9BACE
L3_063_368G1_scaffold_538_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29299..30054
DNA (756bp) protein (252aa)
Anti-sigma factor antagonist n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UA59_9BACE
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
anti-sigma-factor antagonist
L3_063_368G1_scaffold_538_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30065..31015
DNA (951bp) protein (317aa)
ABC transporter substrate-binding protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UHB0_9BACE
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCZ75079.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_063_368G1_scaffold_538_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31028..32962
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UAS1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75080.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Stage II sporulation protein E
L3_063_368G1_scaffold_538_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32975..33382
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBX4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22802.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_538_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33572..34405
DNA (834bp) protein (278aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Endonuclease IV (EC:3.1.21.2 3.1.21.-)
Probable endonuclease 4 n=2 Tax=Bacteroides caccae RepID=A5ZGQ8_9BACE
L3_063_368G1_scaffold_538_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34485..36056)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8V8S3_9BACE
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EDM20616.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Chloride channel protein EriC
L3_063_368G1_scaffold_538_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36144..38894)
DNA (2751bp) protein (917aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ER60_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22799.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_538_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38947..39504)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q1T3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22798.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_538_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39538..39894)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBW9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22797.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_538_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39899..40438)
DNA (540bp) protein (180aa)
RNA polymerase sigma factor n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q160_9BACE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RNA polymerase sigma factor, sigma-70 family
L3_063_368G1_scaffold_538_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40638..40814)
DNA (177bp) protein (59aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGQ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20611.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_063_368G1_scaffold_538_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41264..41701
DNA (438bp) protein (146aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9ER56_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75090.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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