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L3_063_368G1_scaffold_613

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_613_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(74..739)
DNA (666bp) protein (222aa)
Succinate dehydrogenase cytochrome B subunit, b558 family n=2 Tax=Bacteroides caccae RepID=A5ZEH2_9BACE
B558 family succinate dehydrogenase (Or fumarate reductase) cytochrome B subunit {ECO:0000313|EMBL:EIY17979.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
cytochrome subunit B
L3_063_368G1_scaffold_613_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(765..1616)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UUV0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17980.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
transcriptional regulator, AraC family
L3_063_368G1_scaffold_613_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1756..3453)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PNA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17981.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
mucin-desulfating sulfatase
L3_063_368G1_scaffold_613_4
unknown

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comp(3668..3856)
DNA (189bp) protein (63aa)

This feature has no annotations

L3_063_368G1_scaffold_613_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3828..6305)
DNA (2478bp) protein (826aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BC01_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC96044.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L3_063_368G1_scaffold_613_6
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6329..8320)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EDD0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB49892.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
glycoside hydrolase
L3_063_368G1_scaffold_613_7
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8463..10685)
DNA (2223bp) protein (741aa)
Alpha-N-acetylglucosaminidase (NAGLU). (EC:3.2.1.50)
Alpha-N-acetylglucosaminidase (NAGLU) n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NT68_9BACE
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:CDF15253.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
L3_063_368G1_scaffold_613_8
unknown

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10701..10880
DNA (180bp) protein (60aa)

This feature has no annotations

L3_063_368G1_scaffold_613_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10795..12246)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UUU2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17970.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Domain of unknown function (DUF1735).
L3_063_368G1_scaffold_613_10
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12276..14225)
DNA (1950bp) protein (650aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii 1_2_48FAA RepID=E5WZW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV29600.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
RagB/SusD family protein
L3_063_368G1_scaffold_613_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14238..16343)
DNA (2106bp) protein (702aa)
Outer membrane cobalamin receptor protein n=7 Tax=Bacteroides RepID=D6CY17_9BACE
Outer membrane cobalamin receptor protein
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY56981.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_063_368G1_scaffold_613_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16354..17349)
DNA (996bp) protein (332aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UY90_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY17972.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Outer membrane cobalamin receptor protein
L3_063_368G1_scaffold_613_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17546..21736)
DNA (4191bp) protein (1397aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PNR6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17973.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
histidine kinase
L3_063_368G1_scaffold_613_14
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21956..23023
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZQA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD48270.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
hypothetical protein
L3_063_368G1_scaffold_613_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23045..24742
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PNR2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17968.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_613_16
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24821..27151)
DNA (2331bp) protein (777aa)
Beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9TMT2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY70741.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
L3_063_368G1_scaffold_613_17
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27282..29753)
DNA (2472bp) protein (824aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9A9S4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY84082.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_063_368G1_scaffold_613_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30034..32430
DNA (2397bp) protein (799aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L4F6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN04834.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
glycoside hydrolase
L3_063_368G1_scaffold_613_19
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32445..33818
DNA (1374bp) protein (458aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii 1_2_48FAA RepID=E5WZV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV29589.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
hypothetical protein
L3_063_368G1_scaffold_613_20
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33846..35849
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9A8I2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY84085.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Glycoside hydrolase 97.
L3_063_368G1_scaffold_613_21
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36542..37504
DNA (963bp) protein (321aa)
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Tannerella sp. CAG:118 RepID=R5IIM5_9PORP
Nucleotide pyrophosphatase {ECO:0000313|EMBL:KHM44305.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L3_063_368G1_scaffold_613_22
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37539..40382
DNA (2844bp) protein (948aa)
bgl2C; beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A1R8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57934.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
L3_063_368G1_scaffold_613_23
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40412..42109
DNA (1698bp) protein (566aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BA45_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB56987.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L3_063_368G1_scaffold_613_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42573..44162)
DNA (1590bp) protein (530aa)
C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A (EC:3.4.21.102)
C-terminal processing peptidase n=2 Tax=Bacteroides RepID=I9PNS2_9BACE
C-terminal processing peptidase {ECO:0000313|EMBL:EIY17983.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_063_368G1_scaffold_613_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44191..44646)
DNA (456bp) protein (152aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=3 Tax=Bacteroides RepID=A5ZEG6_9BACE
L3_063_368G1_scaffold_613_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44643..46520)
DNA (1878bp) protein (626aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (EC:5.99.1.-)
DNA topoisomerase IV subunit B n=2 Tax=Bacteroides caccae RepID=A5ZEG5_9BACE
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:EDM21331.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Displaying 26 items

View Taxonomy