ggKbase home page

L3_063_368G1_scaffold_779

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_779_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..846)
DNA (846bp) protein (282aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Cytosine-specific methyltransferase n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IG88_9BACE
C-5 cytosine-specific DNA-methylase
L3_063_368G1_scaffold_779_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1194..2045
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L4S4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40688.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_368G1_scaffold_779_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2222..3526)
DNA (1305bp) protein (435aa)
Na+/H+ antiporter family protein n=5 Tax=Bacteroides RepID=C6Z9R2_9BACE
Na+/H+ antiporter
Na+/H+ antiporter family protein {ECO:0000313|EMBL:KDS53830.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_063_368G1_scaffold_779_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3672..5162)
DNA (1491bp) protein (497aa)
D-galactarate dehydratase/altronate hydrolase, C-terminal domain protein n=5 Tax=Bacteroides RepID=D4VDG0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY73544.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
altronate hydrolase
L3_063_368G1_scaffold_779_5
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5184..6257)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZDG8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF18597.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
transcriptional regulator
L3_063_368G1_scaffold_779_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6501..7523
DNA (1023bp) protein (341aa)
2-dehydro-3-deoxygluconokinase n=7 Tax=Bacteroides RepID=A6L4S8_BACV8
2-dehydro-3-deoxygluconokinase
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:KDS53827.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_063_368G1_scaffold_779_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7633..8307
DNA (675bp) protein (225aa)
keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase (EC:4.1.2.14 4.1.3.16)
KDPG and KHG aldolase n=7 Tax=root RepID=D4VDF7_BACVU
KDPG and KHG aldolase {ECO:0000313|EMBL:EET17617.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_063_368G1_scaffold_779_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8561..9379
DNA (819bp) protein (273aa)
Peptidase n=7 Tax=Bacteroides RepID=A6L4T0_BACV8
peptidase
Uncharacterized protein {ECO:0000313|EMBL:EIY73548.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_368G1_scaffold_779_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9878..10711
DNA (834bp) protein (278aa)
Transcriptional regulator, AraC family n=7 Tax=Bacteroides RepID=C6Z9Q6_9BACE
transcriptional regulatory protein
Uncharacterized protein {ECO:0000313|EMBL:EIY73549.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_368G1_scaffold_779_10
unknown

Not on your lists

10764..10892
DNA (129bp) protein (43aa)

This feature has no annotations

L3_063_368G1_scaffold_779_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


10919..14407
DNA (3489bp) protein (1163aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=2 Tax=Bacteroides vulgatus RepID=D4VDF4_BACVU
L3_063_368G1_scaffold_779_12
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14431..14811
DNA (381bp) protein (127aa)
DnaK suppressor protein, putative n=8 Tax=Bacteroides RepID=A6L4T3_BACV8
DnaK suppressor protein
Uncharacterized protein {ECO:0000313|EMBL:EOS12399.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L3_063_368G1_scaffold_779_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14921..15559
DNA (639bp) protein (213aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Lipoprotein signal peptidase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VDF2_BACVU
lipoprotein signal peptidase
L3_063_368G1_scaffold_779_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15563..16537
DNA (975bp) protein (325aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L4T5_BACV8
Uncharacterized protein {ECO:0000313|EMBL:KDS53819.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_063_368G1_scaffold_779_15
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16553..16876
DNA (324bp) protein (108aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L4T6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV68478.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_063_368G1_scaffold_779_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16948..17703)
DNA (756bp) protein (252aa)
TrmH family RNA methyltransferase n=2 Tax=Bacteroides vulgatus RepID=R9HLY3_BACVU
SpoU rRNA Methylase family protein {ECO:0000313|EMBL:KDS33311.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
tRNA/rRNA methyltransferase
L3_063_368G1_scaffold_779_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17805..20129
DNA (2325bp) protein (775aa)
Outer membrane protein, OMP85 family n=6 Tax=Bacteroides RepID=C6Z9P9_9BACE
Surface antigen family protein {ECO:0000313|EMBL:KDS53816.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
membrane protein
L3_063_368G1_scaffold_779_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20146..20394
DNA (249bp) protein (83aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4T9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05060.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_779_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20447..21031
DNA (585bp) protein (195aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L4U0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05061.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_779_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21493..21711
DNA (219bp) protein (73aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z9P6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS33307.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_063_368G1_scaffold_779_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22042..22173)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P2P2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18612.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_063_368G1_scaffold_779_22
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22196..22999)
DNA (804bp) protein (268aa)
Metallo-beta-lactamase domain protein n=4 Tax=Bacteroides RepID=C6Z9P5_9BACE
metallo-beta-lactamase superfamily hydrolase
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EET17604.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_063_368G1_scaffold_779_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23153..24115)
DNA (963bp) protein (321aa)
Transcriptional regulatory protein, C-terminal domain protein n=4 Tax=Bacteroides RepID=D4VDE3_BACVU
transcriptional regulator, two-component response regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS05064.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_779_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24297..25496
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZF39_BACVU
AhpC/TSA family protein {ECO:0000313|EMBL:KDS33304.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
thiol:disulfide interchange protein
L3_063_368G1_scaffold_779_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25585..26991)
DNA (1407bp) protein (469aa)
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Uronate isomerase n=8 Tax=Bacteroides RepID=UXAC_BACV8
L3_063_368G1_scaffold_779_26
unknown

Not on your lists

27061..27165
DNA (105bp) protein (35aa)

This feature has no annotations

L3_063_368G1_scaffold_779_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27317..28756
DNA (1440bp) protein (480aa)
Altronate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00670}; EC=1.1.1.58 {ECO:0000256|HAMAP-Rule:MF_00670};; Tagaturonate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00670}; Tagaturonate reductase {ECO:0000256|HAMAP-Rule:MF_00670}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
altronate oxidoreductase (EC:1.1.1.58)
Altronate oxidoreductase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P2P9_9BACE
L3_063_368G1_scaffold_779_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28893..29270
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZDI6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS53806.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_063_368G1_scaffold_779_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29233..29961)
DNA (729bp) protein (243aa)
Precorrin-2 C20-methyltransferase n=2 Tax=Bacteroides RepID=E5UR03_9BACE
Putative precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:EET17598.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
precorrin-2 C(20)-methyltransferase
L3_063_368G1_scaffold_779_30
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30065..31216
DNA (1152bp) protein (384aa)
Periplasmic binding protein n=4 Tax=Bacteroides RepID=C6Z9N8_9BACE
Exported periplasmic protein {ECO:0000313|EMBL:EFV68491.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
exported periplasmic protein
Displaying items 1-30 of 67 in total

View Taxonomy