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L3_063_368G1_scaffold_890

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_890_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..549)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LDK8_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN01727.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_063_368G1_scaffold_890_2
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(576..1133)
DNA (558bp) protein (186aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=A7M656_BACOV
Protein of unknown function (DUF3575).
Uncharacterized protein {ECO:0000313|EMBL:EEZ03324.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_063_368G1_scaffold_890_3
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1362..4115)
DNA (2754bp) protein (918aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QBB2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDM06757.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Heparinase II/III-like protein.
L3_063_368G1_scaffold_890_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4278..6185
DNA (1908bp) protein (636aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=6 Tax=Bacteroides RepID=D6D3P7_9BACE
Protein HymB {ECO:0000313|EMBL:EFF52263.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_368G1_scaffold_890_5
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6199..7965
DNA (1767bp) protein (589aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenases, Fe-only n=5 Tax=Bacteroides RepID=D6D3P6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02926.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_063_368G1_scaffold_890_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7985..8461
DNA (477bp) protein (159aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase subunit E n=10 Tax=Bacteroides RepID=D6D3P5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY65353.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_063_368G1_scaffold_890_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9029..11257
DNA (2229bp) protein (743aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase n=10 Tax=Bacteroides RepID=C3QBA7_9BACE
Formate acetyltransferase {ECO:0000313|EMBL:EIY65367.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_063_368G1_scaffold_890_8
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11273..12001
DNA (729bp) protein (243aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LE12_BACOV
L3_063_368G1_scaffold_890_9
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12029..12472)
DNA (444bp) protein (148aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDM06698.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CDM06698.1};; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Negative regulator of beta-lactamase expression (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=6 Tax=Bacteroides RepID=C3QBA5_9BACE
L3_063_368G1_scaffold_890_10
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12459..12626)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6KEY8_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM06697.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
L3_063_368G1_scaffold_890_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12647..13150)
DNA (504bp) protein (168aa)
DNA-binding protein, histone-like, putative n=16 Tax=Bacteroides RepID=D6D3H9_9BACE
DNA-binding protein, histone-like, putative
Uncharacterized protein {ECO:0000313|EMBL:EGN01717.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_063_368G1_scaffold_890_12
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13344..13574
DNA (231bp) protein (77aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C3QBA2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ03314.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_063_368G1_scaffold_890_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13662..15779
DNA (2118bp) protein (706aa)
VirE N-terminal domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WCB3_BACOV
VirE N-terminal domain protein {ECO:0000313|EMBL:EFF53873.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Predicted P-loop ATPase and inactivated derivatives
L3_063_368G1_scaffold_890_14
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15912..16001)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JSK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB60791.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_063_368G1_scaffold_890_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16019..16324)
DNA (306bp) protein (102aa)
Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Bacteroides RepID=D4WCB4_BACOV
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:EFF53874.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_890_16
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16680..16814)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JDF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB60793.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_063_368G1_scaffold_890_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16938..18293)
DNA (1356bp) protein (452aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides RepID=D4WCB6_BACOV
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFF53876.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Sugar phosphate permease
L3_063_368G1_scaffold_890_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18307..19212)
DNA (906bp) protein (302aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase family protein n=4 Tax=Bacteroides ovatus RepID=A7M633_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY65382.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_063_368G1_scaffold_890_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19219..20973)
DNA (1755bp) protein (585aa)
PKD domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WCB8_BACOV
PQQ enzyme repeat family protein {ECO:0000313|EMBL:KDS15192.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
PDK repeat-containing protein
L3_063_368G1_scaffold_890_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21002..22156)
DNA (1155bp) protein (385aa)
PKD domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WCB9_BACOV
PKD domain protein {ECO:0000313|EMBL:EFF53879.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Glycerophosphoryl diester phosphodiesterase
L3_063_368G1_scaffold_890_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22169..23614)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6JLZ6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF53880.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
RagB/SusD family protein
L3_063_368G1_scaffold_890_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23634..27176)
DNA (3543bp) protein (1181aa)
TonB-dependent receptor plug domain protein n=2 Tax=Bacteroides RepID=D4WCC1_BACOV
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EFF53881.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
SusC/RagA family TonB-linked outer membrane protein
L3_063_368G1_scaffold_890_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27336..28298)
DNA (963bp) protein (321aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WCC2_BACOV
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFF53882.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Fe2+-dicitrate sensor, membrane component
L3_063_368G1_scaffold_890_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28362..28958)
DNA (597bp) protein (199aa)
RNA polymerase sigma factor n=8 Tax=Bacteroides RepID=A7M626_BACOV
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_063_368G1_scaffold_890_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29171..30475)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6JEF1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF53884.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_890_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30482..31030)
DNA (549bp) protein (183aa)
Sigma-70 region 2 n=5 Tax=Bacteroides RepID=A7M623_BACOV
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EIY65391.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
RNA polymerase sigma factor, sigma-70 family
L3_063_368G1_scaffold_890_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31206..31928
DNA (723bp) protein (241aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=E5C425_9BACE
Putative lipoprotein {ECO:0000313|EMBL:EFF53886.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
Displaying 27 items

View Taxonomy