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L3_063_368G1_scaffold_936

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_936_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(258..1433)
DNA (1176bp) protein (392aa)
Glycosyltransferase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH7_BIFLN
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AEI98507.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_063_368G1_scaffold_936_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1497..2489)
DNA (993bp) protein (331aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8APH4_BIFLN
ribonucleotide-diphosphate reductase subunit beta
L3_063_368G1_scaffold_936_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2800..4995)
DNA (2196bp) protein (732aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410, ECO:0000313|EMBL:CBK71376.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=B3DP48_BIFLD
ribonucleoside-diphosphate reductase subunit alpha
L3_063_368G1_scaffold_936_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5111..5569)
DNA (459bp) protein (153aa)
Protein NrdI n=7 Tax=Bifidobacterium longum RepID=B3DP47_BIFLD
ribonucleotide reductase
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_063_368G1_scaffold_936_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5566..5832)
DNA (267bp) protein (89aa)
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit {ECO:0000313|EMBL:CBK71375.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBK71375.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Glutaredoxin-like protein NrdH n=19 Tax=Bifidobacterium RepID=Q8G6H3_BIFLO
glutaredoxin
L3_063_368G1_scaffold_936_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6420..7070)
DNA (651bp) protein (217aa)
DNA-binding helix-turn-helix protein n=3 Tax=Bifidobacterium RepID=C2GWT9_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ72100.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_063_368G1_scaffold_936_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7054..7734)
DNA (681bp) protein (227aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=Q8G6H6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY33258.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_063_368G1_scaffold_936_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7896..8696
DNA (801bp) protein (267aa)
Kch n=9 Tax=Bifidobacterium RepID=E4R1Q5_BIFLM
Potassium transport protein {ECO:0000313|EMBL:CCY95569.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
potassium transport protein
L3_063_368G1_scaffold_936_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8889..9995
DNA (1107bp) protein (369aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=Q8G6H8_BIFLO
hypothetical protein
ATPase AAA {ECO:0000313|EMBL:KEY24078.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_063_368G1_scaffold_936_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10581..12728
DNA (2148bp) protein (716aa)
Widely conserved protein with eukaryotic protein kinase domain n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6I0_BIFLO
Widely conserved protein with eukaryotic protein kinase domain {ECO:0000313|EMBL:AAN24482.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L3_063_368G1_scaffold_936_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12906..13883
DNA (978bp) protein (326aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G6I1_BIFLO
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AIW43078.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_063_368G1_scaffold_936_12
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14402..15871
DNA (1470bp) protein (490aa)
G5 domain-containing protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXQ1_9BIFI
G5 domain-containing protein {ECO:0000313|EMBL:EFV37623.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
lytic transglycosylase
L3_063_368G1_scaffold_936_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15904..16827
DNA (924bp) protein (308aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Ribosomal RNA small subunit methyltransferase A n=11 Tax=Bifidobacterium RepID=RSMA_BIFLS
dimethyladenosine transferase
L3_063_368G1_scaffold_936_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16824..17774
DNA (951bp) protein (317aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=10 Tax=Bifidobacterium RepID=ISPE_BIFLO
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_063_368G1_scaffold_936_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17821..18450
DNA (630bp) protein (210aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DP36_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98895.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_063_368G1_scaffold_936_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18534..19949)
DNA (1416bp) protein (472aa)
Putative RNA nucleotidyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWG7_BIFL1
RNA nucleotidyltransferase
Putative RNA nucleotidyltransferase {ECO:0000313|EMBL:BAJ72111.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_063_368G1_scaffold_936_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20036..21328
DNA (1293bp) protein (431aa)
ADP-ribose pyrophosphatase n=10 Tax=Bifidobacterium RepID=B3DP34_BIFLD
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KEY33269.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_063_368G1_scaffold_936_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21325..23595
DNA (2271bp) protein (757aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=Q8G6I8_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:AAN24474.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L3_063_368G1_scaffold_936_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23592..25319
DNA (1728bp) protein (576aa)
Integral membrane protein MviN n=8 Tax=Bifidobacterium RepID=E5XXQ8_9BIFI
Membrane protein {ECO:0000313|EMBL:KEY33271.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L3_063_368G1_scaffold_936_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25402..27465
DNA (2064bp) protein (688aa)
Uncharacterized membrane protein, putative virulence factor n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DB08_BIFLN
Uncharacterized membrane protein, putative virulence factor {ECO:0000313|EMBL:CBK71361.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Uncharacterized membrane protein, putative virulence factor
L3_063_368G1_scaffold_936_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27584..28603
DNA (1020bp) protein (340aa)
Thioredoxin reductase {ECO:0000313|EMBL:KFI73200.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KFI73200.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Thioredoxin reductase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX46_BIFLJ
thioredoxin reductase
L3_063_368G1_scaffold_936_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28798..28980)
DNA (183bp) protein (61aa)
Transposase, Mutator family n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9A1_BIFLI
Transposase, Mutator family {ECO:0000313|EMBL:EEQ54725.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
mutator type transposase
L3_063_368G1_scaffold_936_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28977..30050)
DNA (1074bp) protein (358aa)
Mutator type transposase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 PF0_BIFLN">RepID=F8APF0_BIFLN
mutator type transposase
Mutator type transposase {ECO:0000313|EMBL:AEI98480.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_063_368G1_scaffold_936_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30198..30959)
DNA (762bp) protein (254aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9A0_BIFLI
N-acetylglucosamine-6-phosphate deacetylase
Displaying 24 items

View Taxonomy