ggKbase home page

L3_063_368G1_scaffold_945

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_945_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..100)
DNA (99bp) protein (33aa)
Uncharacterized protein (Fragment) n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PPT6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18561.1}; Flags: Fragment;; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_063_368G1_scaffold_945_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(132..1679)
DNA (1548bp) protein (516aa)
Arylsulfatase {ECO:0000313|EMBL:EDM21798.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDM21798.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Arylsulfatase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBC9_9BACE
putative arylsulfatase precursor
L3_063_368G1_scaffold_945_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1803..2354)
DNA (552bp) protein (184aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroides RepID=A5ZBD0_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CCZ74137.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative sigma factor
L3_063_368G1_scaffold_945_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2450..3484
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBD1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21800.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative anti-sigma factor
L3_063_368G1_scaffold_945_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3542..6892
DNA (3351bp) protein (1117aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UXL7_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY18930.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_945_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6913..8988
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EFW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18929.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_945_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9017..10408
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRE1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18928.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_945_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10508..13441
DNA (2934bp) protein (978aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBD5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21804.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
lipoprotein
L3_063_368G1_scaffold_945_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13579..14766)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBD6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18926.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_945_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14782..15840)
DNA (1059bp) protein (353aa)
asparaginase (EC:3.5.1.1)
L-asparaginase, type II n=2 Tax=Bacteroides RepID=I8UXL3_9BACE
L-asparaginase type II {ECO:0000313|EMBL:CCZ74144.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_063_368G1_scaffold_945_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15873..17183)
DNA (1311bp) protein (437aa)
Transporter, anaerobic C4-dicarboxylate uptake (Dcu) family n=3 Tax=Bacteroides RepID=A5ZBD8_9BACE
Anaerobic C4-dicarboxylate uptake (Dcu) family transporter {ECO:0000313|EMBL:CCZ74145.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
anaerobic c4-dicarboxylate membrane transporter family protein
L3_063_368G1_scaffold_945_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17360..18793
DNA (1434bp) protein (478aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase n=3 Tax=Bacteroides RepID=I9PRD5_9BACE
L3_063_368G1_scaffold_945_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19022..20392
DNA (1371bp) protein (457aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBE1_9BACE
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDM21810.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
L3_063_368G1_scaffold_945_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21513..21944
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PQT7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74148.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_063_368G1_scaffold_945_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22079..22651
DNA (573bp) protein (191aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21812.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_063_368G1_scaffold_945_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22731..25187
DNA (2457bp) protein (819aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
primosomal protein N' (EC:3.6.1.-)
Primosomal protein N n=2 Tax=Bacteroides RepID=A5ZBE4_9BACE
L3_063_368G1_scaffold_945_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25244..27040
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18918.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_945_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27101..27571
DNA (471bp) protein (157aa)
protein tyrosine phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=3 Tax=Bacteroides RepID=A5ZBE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74152.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_063_368G1_scaffold_945_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27546..29618)
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U7Q9_9BACE
7TM receptor with intracellular HD hydrolase {ECO:0000313|EMBL:EDM21816.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
uncharacterized domain HDIG
L3_063_368G1_scaffold_945_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29713..31116
DNA (1404bp) protein (468aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=2 Tax=Bacteroides RepID=A5ZBE8_9BACE
L3_063_368G1_scaffold_945_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31134..32357
DNA (1224bp) protein (408aa)
3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBE9_9BACE
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EDM21818.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_063_368G1_scaffold_945_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32495..34129)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5USQ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74156.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
thiol:disulfide interchange protein TlpA
L3_063_368G1_scaffold_945_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34126..34548)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V0Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18912.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
thiol:disulfide interchange protein
L3_063_368G1_scaffold_945_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34765..35280)
DNA (516bp) protein (172aa)
Bacterial transferase hexapeptide repeat protein n=3 Tax=Bacteroides RepID=A5ZBF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74279.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L3_063_368G1_scaffold_945_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35360..37141)
DNA (1782bp) protein (594aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Creatinase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZBF3_9BACE
Creatinase {ECO:0000313|EMBL:EDM21822.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_063_368G1_scaffold_945_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37331..37522
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=3 Tax=Bacteroides RepID=A5ZBF4_9BACE
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
30S ribosomal protein S21
Displaying 26 items

View Taxonomy