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L3_063_368G1_scaffold_982

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_982_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(403..4374)
DNA (3972bp) protein (1324aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNH5_BACOV
Response regulator receiver domain protein {ECO:0000313|EMBL:EFF49874.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Signal transduction histidine kinase
L3_063_368G1_scaffold_982_2
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4988..6712
DNA (1725bp) protein (575aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JY12_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI39361.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_063_368G1_scaffold_982_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7149..9551)
DNA (2403bp) protein (801aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 C-terminal domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNH8_BACOV
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EFF49877.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_368G1_scaffold_982_4
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9815..10333)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6JIP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB57671.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Predicted flavin-nucleotide-binding protein
L3_063_368G1_scaffold_982_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10379..12535)
DNA (2157bp) protein (719aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNI0_BACOV
L3_063_368G1_scaffold_982_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12776..13924)
DNA (1149bp) protein (383aa)
Conserved domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNI1_BACOV
Conserved domain protein {ECO:0000313|EMBL:EFF49880.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Fibrobacter succinogenes major domain (Fib_succ_major).
L3_063_368G1_scaffold_982_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13960..15093)
DNA (1134bp) protein (378aa)
Conserved domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNI2_BACOV
Conserved domain protein {ECO:0000313|EMBL:EFF49881.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Fibrobacter succinogenes major domain (Fib_succ_major).
L3_063_368G1_scaffold_982_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15097..16137)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7LY17_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO11524.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_063_368G1_scaffold_982_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16145..17461)
DNA (1317bp) protein (439aa)
Putative lipoprotein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNI4_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF49883.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_982_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17474..18370)
DNA (897bp) protein (299aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6J8V5_9BACE
Putative lipoprotein {ECO:0000313|EMBL:EFF49884.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_982_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18392..19960)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8Y2N2_BACOV
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS20161.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
SusD family.
L3_063_368G1_scaffold_982_12
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19984..23574)
DNA (3591bp) protein (1197aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JY01_9BACE
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:EFI39350.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_063_368G1_scaffold_982_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23727..24890)
DNA (1164bp) protein (388aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=C3QS11_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY57377.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Fe2+-dicitrate sensor, membrane component
L3_063_368G1_scaffold_982_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24953..25555)
DNA (603bp) protein (201aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides RepID=D4WNJ0_BACOV
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFF49889.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_063_368G1_scaffold_982_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25600..26607
DNA (1008bp) protein (336aa)
Nucleoside-diphosphate-sugar epimerases (EC:5.1.3.2)
NAD-binding protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNJ1_BACOV
NAD-binding protein {ECO:0000313|EMBL:EFF49890.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_368G1_scaffold_982_16
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26598..27563
DNA (966bp) protein (322aa)
PAP2 family protein n=2 Tax=Bacteroides RepID=D4WNJ2_BACOV
PAP2 superfamily domain protein {ECO:0000313|EMBL:EFI39346.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
PAP2 superfamily.
L3_063_368G1_scaffold_982_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(27654..28649)
DNA (996bp) protein (332aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
tRNA-dihydrouridine synthase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNJ3_BACOV
tRNA-U20-dihydrouridine synthase
L3_063_368G1_scaffold_982_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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28904..29947
DNA (1044bp) protein (348aa)
collagenase. Unknown type peptidase. MEROPS family U32 (EC:3.4.-.-)
Collagenase n=7 Tax=Bacteroides RepID=C3QS06_9BACE
Peptidase U32 family protein {ECO:0000313|EMBL:KDS20168.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
L3_063_368G1_scaffold_982_19
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30000..30401
DNA (402bp) protein (134aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=3 Tax=Bacteroides RepID=C3QS05_9BACE
Acyl-CoA thioester hydrolase YbgC/YbaW family {ECO:0000313|EMBL:CDB57656.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
conserved hypothetical protein TIGR00051
L3_063_368G1_scaffold_982_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30398..31522
DNA (1125bp) protein (375aa)
DNA protecting protein DprA n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WNJ6_BACOV
DNA protecting protein DprA {ECO:0000313|EMBL:EFF49895.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
DNA protecting protein DprA
L3_063_368G1_scaffold_982_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32362..32586)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E5CB78_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY57385.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
transcriptional regulator
L3_063_368G1_scaffold_982_22
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32712..33125
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=I0PXW7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC71762.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Displaying 22 items

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