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L3_063_368G1_scaffold_993

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_993_1
unknown

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comp(3..77)
DNA (75bp) protein (25aa)
putative RNA polymerase sigma factor RpoD
L3_063_368G1_scaffold_993_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(262..1797)
DNA (1536bp) protein (512aa)
Peptidase Do n=7 Tax=Bacteroides RepID=A7LS33_BACOV
Protease Do {ECO:0000313|EMBL:EIY61362.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
periplasmic serine protease, Do/DeqQ family
L3_063_368G1_scaffold_993_3
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2017..3168)
DNA (1152bp) protein (384aa)
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily (EC:5.5.1.7)
Chloromuconate cycloisomerase YkfB1 n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6J3A5_9BACE
Chloromuconate cycloisomerase YkfB1 {ECO:0000313|EMBL:CDB57158.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_368G1_scaffold_993_4
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3173..4153)
DNA (981bp) protein (327aa)
Dipeptidyl-peptidase VI n=2 Tax=Bacteroides RepID=D7K7M5_9BACE
Dipeptidyl-peptidase VI {ECO:0000313|EMBL:CDB57159.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_063_368G1_scaffold_993_5
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4658..5977
DNA (1320bp) protein (440aa)
tRNA-processing RNAse BN (EC:3.1.-.-)
YihY family protein n=8 Tax=Bacteroides RepID=A7LS29_BACOV
YihY family protein {ECO:0000313|EMBL:EFS32851.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L3_063_368G1_scaffold_993_6
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6029..9313
DNA (3285bp) protein (1095aa)
MdsD protein n=2 Tax=Bacteroides RepID=D7K7M3_9BACE
MdsD protein {ECO:0000313|EMBL:EFI37723.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
putative exported peptidase
L3_063_368G1_scaffold_993_7
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9527..10090)
DNA (564bp) protein (188aa)
Nitroreductase family protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K7M2_9BACE
Nitroreductase family protein {ECO:0000313|EMBL:EFI37722.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Nitroreductase
L3_063_368G1_scaffold_993_8
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10105..10707)
DNA (603bp) protein (201aa)
riboflavin synthase, alpha subunit (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=8 Tax=Bacteroides RepID=C3R1R7_9BACE
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EFI37721.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_063_368G1_scaffold_993_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11083..11772)
DNA (690bp) protein (230aa)
Phosphate-specific transport system accessory protein PhoU n=9 Tax=Bacteroides RepID=A7LS25_BACOV
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
phosphate uptake regulator, PhoU
L3_063_368G1_scaffold_993_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11828..12586)
DNA (759bp) protein (253aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=8 Tax=Bacteroides RepID=A7LS24_BACOV
L3_063_368G1_scaffold_993_11
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12595..13470)
DNA (876bp) protein (292aa)
Phosphate ABC transporter, permease protein PstA n=5 Tax=Bacteroides RepID=C3R1Q5_9BACE
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EFI37718.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
ABC transporter permease
L3_063_368G1_scaffold_993_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13472..14668)
DNA (1197bp) protein (399aa)
Phosphate ABC transporter, permease protein PstC n=4 Tax=Bacteroides RepID=C3R1Q4_9BACE
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:KDS12926.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L3_063_368G1_scaffold_993_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14846..15658
DNA (813bp) protein (271aa)
Phosphate binding protein n=3 Tax=Bacteroides RepID=D4WH24_BACOV
Phosphate binding protein {ECO:0000313|EMBL:EIY56568.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_063_368G1_scaffold_993_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15707..17446
DNA (1740bp) protein (580aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WH23_BACOV
L3_063_368G1_scaffold_993_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17549..19000
DNA (1452bp) protein (484aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WH22_BACOV
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFF52169.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Tetratricopeptide repeat.
L3_063_368G1_scaffold_993_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19031..19675
DNA (645bp) protein (215aa)
SNARE-like domain protein n=6 Tax=Bacteroides RepID=A7LS18_BACOV
SNARE-like domain protein {ECO:0000313|EMBL:EDO13705.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Uncharacterized membrane-associated protein
L3_063_368G1_scaffold_993_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19845..20729)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WH20_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF52167.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_993_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20928..21428)
DNA (501bp) protein (167aa)
thiol peroxidase (atypical 2-Cys peroxiredoxin) (EC:1.11.1.15 1.11.1.5)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
Probable thiol peroxidase n=15 Tax=Bacteroides RepID=D6D442_9BACE
L3_063_368G1_scaffold_993_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21566..22129
DNA (564bp) protein (188aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7LS15_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM96192.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_063_368G1_scaffold_993_20
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22213..22692
DNA (480bp) protein (160aa)
Uncharacterized protein n=17 Tax=Bacteroides RepID=A7LS14_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO52937.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_063_368G1_scaffold_993_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22699..23367
DNA (669bp) protein (223aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WH16_BACOV
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EFF52163.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
pyridoxal phosphate enzyme, YggS family
L3_063_368G1_scaffold_993_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23391..24368
DNA (978bp) protein (326aa)
Dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase 2 n=7 Tax=Bacteroides RepID=A7LS12_BACOV
Dihydroorotate oxidase {ECO:0000313|EMBL:EFF52162.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_368G1_scaffold_993_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24488..25813)
DNA (1326bp) protein (442aa)
PhoH family protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WH14_BACOV
PhoH family protein {ECO:0000313|EMBL:EFF52161.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Predicted ATPase related to phosphate starvation-inducible protein PhoH
L3_063_368G1_scaffold_993_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25945..27435
DNA (1491bp) protein (497aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Bifunctional protein FolC n=8 Tax=Bacteroides RepID=C3QLU9_9BACE
FolC protein {ECO:0000313|EMBL:EIY61396.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_063_368G1_scaffold_993_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27403..27777)
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP n=8 Tax=Bacteroides RepID=F7L8H7_BACOV
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EDO13696.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
endoribonuclease L-PSP
L3_063_368G1_scaffold_993_26
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27873..29489
DNA (1617bp) protein (539aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C3QLU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ02137.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
hypothetical protein
L3_063_368G1_scaffold_993_27
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29511..30179
DNA (669bp) protein (223aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3QLU6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI37702.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_063_368G1_scaffold_993_28
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30200..32629
DNA (2430bp) protein (810aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides RepID=D4WH09_BACOV
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDB58732.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Displaying 28 items

View Taxonomy