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L3_063_368G1_scaffold_1028

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_1028_1
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..469)
DNA (468bp) protein (156aa)
IS66 family element, transposase n=7 Tax=Bacteroides RepID=D0TYH3_9BACE
IS66 family element, transposase {ECO:0000313|EMBL:EEZ01513.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
transposase
L3_063_368G1_scaffold_1028_2
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(552..917)
DNA (366bp) protein (122aa)
IS66 family element, Orf2 protein n=11 Tax=Bacteroides RepID=D4VT46_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY30378.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
IS66 Orf2 family protein
L3_063_368G1_scaffold_1028_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(901..1335)
DNA (435bp) protein (145aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=D4X3B3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS11004.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
transposase
L3_063_368G1_scaffold_1028_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2238..6203
DNA (3966bp) protein (1322aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Bacteroides RepID=D4WAQ7_BACOV
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFF54396.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
histidine kinase
L3_063_368G1_scaffold_1028_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6773..7264)
DNA (492bp) protein (164aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3QDC2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22448.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_1028_6
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7267..7719)
DNA (453bp) protein (151aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3QDC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ02425.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
hypothetical protein
L3_063_368G1_scaffold_1028_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7801..9081)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I8V7M2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22450.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_1028_8
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11326..12075)
DNA (750bp) protein (250aa)
Glycerophosphodiester phosphodiesterase family protein n=9 Tax=Bacteroides RepID=D0TV30_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN01059.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L3_063_368G1_scaffold_1028_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12131..14023)
DNA (1893bp) protein (631aa)
Putative lipoprotein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WAQ1_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF54390.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
SusD family.
L3_063_368G1_scaffold_1028_10
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14042..17200)
DNA (3159bp) protein (1053aa)
TonB-linked outer membrane protein, SusC/RagA family n=7 Tax=Bacteroides RepID=C3QRE9_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKJ91327.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
Outer membrane cobalamin receptor protein
L3_063_368G1_scaffold_1028_11
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17204..17332)
DNA (129bp) protein (43aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=G1UKF3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ91326.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L3_063_368G1_scaffold_1028_12
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17592..21560)
DNA (3969bp) protein (1323aa)
Response regulator receiver domain protein n=5 Tax=Bacteroides RepID=C9KUH9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN01055.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
two-component system sensor histidine kinase/response regulator
L3_063_368G1_scaffold_1028_13
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21633..23681)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C3QDD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO49966.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
L3_063_368G1_scaffold_1028_14
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23912..24154
DNA (243bp) protein (81aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=C3QDD3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ02434.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
transposase
L3_063_368G1_scaffold_1028_15
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24311..25438)
DNA (1128bp) protein (376aa)
Transcriptional regulator, AraC family n=10 Tax=Bacteroides RepID=C3QDD4_9BACE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEO49968.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
L3_063_368G1_scaffold_1028_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25616..26902
DNA (1287bp) protein (429aa)
Transposase, IS4 family n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WAP5_BACOV
Transposase, IS4 family {ECO:0000313|EMBL:EFF54384.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
transposase
L3_063_368G1_scaffold_1028_17
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27963..28418
DNA (456bp) protein (152aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Ferritin-like protein n=11 Tax=Bacteroides RepID=D0TV41_9BACE
ferritin
L3_063_368G1_scaffold_1028_18
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28499..29146
DNA (648bp) protein (216aa)
Membrane protein, MarC family n=13 Tax=Bacteroides RepID=C3QDD9_9BACE
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
antibiotic resistance protein MarC
L3_063_368G1_scaffold_1028_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29193..29675
DNA (483bp) protein (161aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Ferritin n=13 Tax=Bacteroides RepID=C3QDE0_9BACE
ferritin
L3_063_368G1_scaffold_1028_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29699..30751
DNA (1053bp) protein (351aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Deoxyribose-phosphate aldolase n=12 Tax=Bacteroides RepID=C3QDE1_9BACE
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:EFF54379.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_368G1_scaffold_1028_21
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30764..31513
DNA (750bp) protein (250aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=12 Tax=Bacteroides RepID=C3QDE2_9BACE
gpmA; phosphoglyceromutase
L3_063_368G1_scaffold_1028_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31590..32018
DNA (429bp) protein (143aa)
Hsp20/alpha crystallin family protein n=13 Tax=Bacteroides RepID=C9KUJ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22465.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
heat-shock protein
L3_063_368G1_scaffold_1028_23
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32119..32616
DNA (498bp) protein (166aa)
Sigma-70 region 2 n=13 Tax=Bacteroides RepID=C3QDE4_9BACE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CDB58163.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
RNA polymerase sigma factor, sigma-70 family
L3_063_368G1_scaffold_1028_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32639..33625
DNA (987bp) protein (329aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
6-phosphofructokinase n=13 Tax=Bacteroides RepID=C3QDE5_9BACE
6-phosphofructokinase
L3_063_368G1_scaffold_1028_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33638..35413
DNA (1776bp) protein (592aa)
Transporter, CPA2 family n=11 Tax=Bacteroides RepID=C3QDE6_9BACE
Transporter, CPA2 family {ECO:0000313|EMBL:EFF54374.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
sodium:proton antiporter
L3_063_368G1_scaffold_1028_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35420..35833
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6JAD6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF54373.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
alpha-glucan phosphorylase
L3_063_368G1_scaffold_1028_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35815..37977
DNA (2163bp) protein (721aa)
Alpha-glucan phosphorylase n=2 Tax=Bacteroides RepID=D4WAN3_BACOV
Alpha-glucan phosphorylase {ECO:0000313|EMBL:EFF54372.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
alpha-glucan phosphorylase
L3_063_368G1_scaffold_1028_28
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37984..38802
DNA (819bp) protein (273aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=C3QDE8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEX46205.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
arginase
Displaying 28 items

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