ggKbase home page

L3_063_368G1_scaffold_1041

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_1041_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..472
DNA (471bp) protein (157aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=2 Tax=Bacteroides caccae RepID=A5ZB75_9BACE
L3_063_368G1_scaffold_1041_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

621..1190
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides RepID=A5ZB76_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDM21745.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_063_368G1_scaffold_1041_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1279..2217
DNA (939bp) protein (313aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides caccae RepID=A5ZB77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18968.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
anti-FecI sigma factor, FecR
L3_063_368G1_scaffold_1041_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2367..5768
DNA (3402bp) protein (1134aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V139_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY18967.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative outer membrane protein
L3_063_368G1_scaffold_1041_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5789..7642
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PQX5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18966.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative outer membrane protein
L3_063_368G1_scaffold_1041_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7687..8157
DNA (471bp) protein (157aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZB80_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74860.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_063_368G1_scaffold_1041_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8284..9411
DNA (1128bp) protein (376aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZB81_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18964.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative transmembrane protein
L3_063_368G1_scaffold_1041_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10143..10331
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18963.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_063_368G1_scaffold_1041_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10545..13808
DNA (3264bp) protein (1088aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V136_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY18962.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_1041_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13819..15744
DNA (1926bp) protein (642aa)
SusD family protein n=2 Tax=Bacteroides caccae RepID=A5ZB84_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18961.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_1041_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15778..17034
DNA (1257bp) protein (419aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZB85_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18960.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_1041_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17051..18229
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EFZ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18959.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
chitobiase
L3_063_368G1_scaffold_1041_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18438..20246
DNA (1809bp) protein (603aa)
Alpha-1,3-galactosidase A n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PRG5_9BACE
Alpha-1,3-galactosidase A {ECO:0000313|EMBL:EIY18958.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_368G1_scaffold_1041_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20271..22766
DNA (2496bp) protein (832aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZB88_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21757.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_063_368G1_scaffold_1041_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22774..23331
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5V1M2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74852.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
chromate transport protein
L3_063_368G1_scaffold_1041_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23328..23852
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UXP0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18955.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
chromate transport protein
L3_063_368G1_scaffold_1041_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23932..25248
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EFZ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18954.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Mismatch repair ATPase (MutS family)
L3_063_368G1_scaffold_1041_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25310..27109)
DNA (1800bp) protein (600aa)
GTP-binding protein TypA n=3 Tax=Bacteroides RepID=A5ZB92_9BACE
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CCZ74849.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
GTP-binding elongation factor family protein TypA/BipA
L3_063_368G1_scaffold_1041_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


27180..27449
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=3 Tax=Bacteroides RepID=R5U9J6_9BACE
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
SSU ribosomal protein S15P
L3_063_368G1_scaffold_1041_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27635..28210
DNA (576bp) protein (192aa)
DNA-binding helix-turn-helix protein n=3 Tax=Bacteroides RepID=A5ZB94_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18951.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
transcriptional regulator
L3_063_368G1_scaffold_1041_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28244..29893
DNA (1650bp) protein (550aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.-)
AMP-binding domain protein n=2 Tax=Bacteroides caccae RepID=A5ZB95_9BACE
AMP-binding domain protein {ECO:0000313|EMBL:EDM21764.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_063_368G1_scaffold_1041_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30057..31139)
DNA (1083bp) protein (361aa)
mannose-1-phosphate guanylyltransferase (GDP) (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=2 Tax=Bacteroides caccae RepID=I9EFY7_9BACE
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EIY18949.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_063_368G1_scaffold_1041_23
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31354..32919)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H5D3_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR99272.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Resolvase domain-containing protein
L3_063_368G1_scaffold_1041_24
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32916..33071)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JVM5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ24274.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_063_368G1_scaffold_1041_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33283..33909)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9ANN9_BACFG
Resolvase, N terminal domain protein {ECO:0000313|EMBL:EYA37117.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
Resolvase domain
L3_063_368G1_scaffold_1041_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34041..34265
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HDM0_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EYA37116.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L3_063_368G1_scaffold_1041_27
unknown

Not on your lists

34590..35150
DNA (561bp) protein (187aa)

This feature has no annotations

L3_063_368G1_scaffold_1041_28
unknown

Not on your lists

35147..35506
DNA (360bp) protein (120aa)

This feature has no annotations

L3_063_368G1_scaffold_1041_29
unknown

Not on your lists

35511..35786
DNA (276bp) protein (92aa)

This feature has no annotations

L3_063_368G1_scaffold_1041_30
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35880..36878)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H5H0_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR99266.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Displaying items 1-30 of 31 in total

View Taxonomy