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L3_063_368G1_scaffold_1479

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_1479_1
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(91..318)
DNA (228bp) protein (76aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EEZ02163.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EEZ02163.1};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
UDP-galactopyranose mutase n=4 Tax=Bacteroides RepID=C3QFT0_9BACE
UDP-galactopyranose mutase
L3_063_368G1_scaffold_1479_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(305..1225)
DNA (921bp) protein (307aa)
NAD dependent epimerase/dehydratase family protein n=7 Tax=Bacteroides RepID=C3QFS9_9BACE
NAD-binding protein {ECO:0000313|EMBL:EFF53307.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
nad-dependent epimerase/dehydratase
L3_063_368G1_scaffold_1479_3
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1222..2301)
DNA (1080bp) protein (360aa)
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:EEZ02165.1}; EC=4.2.1.45 {ECO:0000313|EMBL:EEZ02165.1};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
CDP-glucose 4,6-dehydratase n=7 Tax=Bacteroides RepID=C3QFS8_9BACE
putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase
L3_063_368G1_scaffold_1479_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2305..3084)
DNA (780bp) protein (260aa)
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:EFF53305.1}; EC=2.7.7.33 {ECO:0000313|EMBL:EFF53305.1};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Glucose-1-phosphate cytidylyltransferase n=7 Tax=Bacteroides RepID=C3QFS7_9BACE
putative LPS biosynthesis-related sugar-phosphate nucleotidyltransferase
L3_063_368G1_scaffold_1479_5
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3183..3287)
DNA (105bp) protein (35aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UK97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB58764.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_368G1_scaffold_1479_6
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3256..4665)
DNA (1410bp) protein (470aa)
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:EEZ02167.1}; EC=2.7.8.- {ECO:0000313|EMBL:EEZ02167.1};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Undecaprenyl-phosphate glucose phosphotransferase n=7 Tax=Bacteroides RepID=C3QFS6_9BACE
glycosyl transferase
L3_063_368G1_scaffold_1479_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4686..5822)
DNA (1137bp) protein (379aa)
Chain length determinant protein n=2 Tax=Bacteroides RepID=D4WDR5_BACOV
Chain length determinant protein {ECO:0000313|EMBL:EFF53303.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_1479_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5835..8171)
DNA (2337bp) protein (779aa)
Polysaccharide biosynthesis/export protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WDR4_BACOV
Polysaccharide biosynthesis/export protein {ECO:0000313|EMBL:EFF53302.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
polysialic acid transport protein kpsD
L3_063_368G1_scaffold_1479_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8227..8562)
DNA (336bp) protein (112aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9HZI4_BACOV
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:EFF50826.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_1479_10
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8520..8822)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=I0PY34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC71829.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
transcriptional regulator
L3_063_368G1_scaffold_1479_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9179..10123)
DNA (945bp) protein (315aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9SLB3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61426.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Site-specific recombinase XerD
L3_063_368G1_scaffold_1479_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10483..12189)
DNA (1707bp) protein (569aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WL07_BACOV
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFF50749.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_1479_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12191..12934)
DNA (744bp) protein (248aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=8 Tax=Bacteroides RepID=A7LQX6_BACOV
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EIY61428.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_063_368G1_scaffold_1479_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12976..14637)
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WL10_BACOV
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
recombination protein RecN
L3_063_368G1_scaffold_1479_15
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14664..15872)
DNA (1209bp) protein (403aa)
Phosphopantothenate-cysteine ligase/Phosphopantothenoylcysteine decarboxylase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JS55_9BACE
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDB60631.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_368G1_scaffold_1479_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15872..16651)
DNA (780bp) protein (260aa)
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases (EC:2.7.7.7)
Exonuclease n=8 Tax=Bacteroides RepID=A7LQX9_BACOV
Exonuclease {ECO:0000313|EMBL:EDO14090.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_063_368G1_scaffold_1479_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16753..17877)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=8 Tax=Bacteroides RepID=A7LQY0_BACOV
L3_063_368G1_scaffold_1479_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17903..18259
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9SYV9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM95385.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Protein of unknown function (DUF3127).
L3_063_368G1_scaffold_1479_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18365..19939)
DNA (1575bp) protein (525aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WL15_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF50757.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_368G1_scaffold_1479_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20023..20781)
DNA (759bp) protein (253aa)
Metallo-beta-lactamase domain protein n=5 Tax=Bacteroides RepID=C3R1J5_9BACE
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:KDS24012.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hydrolase
L3_063_368G1_scaffold_1479_21
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20792..21784)
DNA (993bp) protein (331aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=5 Tax=Bacteroides RepID=A7LQY5_BACOV
L3_063_368G1_scaffold_1479_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21832..22680)
DNA (849bp) protein (283aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7LQY6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO14097.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_063_368G1_scaffold_1479_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22680..23633)
DNA (954bp) protein (318aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
NAD dependent epimerase/dehydratase family protein n=5 Tax=Bacteroides RepID=D4WL19_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61438.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_063_368G1_scaffold_1479_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23770..24963
DNA (1194bp) protein (398aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
Glycine C-acetyltransferase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WL20_BACOV
L3_063_368G1_scaffold_1479_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25166..25573
DNA (408bp) protein (136aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3R1J0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM95392.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Protein of unknown function (DUF2721).
L3_063_368G1_scaffold_1479_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25605..26357)
DNA (753bp) protein (251aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WL22_BACOV
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_063_368G1_scaffold_1479_27
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26333..27532)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6JPI1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB60619.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_063_368G1_scaffold_1479_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27548..27868)
DNA (321bp) protein (107aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9SLC8_BACOV
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_063_368G1_scaffold_1479_29
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28025..28504)
DNA (480bp) protein (160aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Ferritin-like protein n=17 Tax=Bacteroides RepID=D6D485_9BACE
Ferritin-like protein
L3_063_368G1_scaffold_1479_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28646..29806)
DNA (1161bp) protein (387aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Diaminopimelate decarboxylase n=5 Tax=Bacteroides RepID=D4WL26_BACOV
diaminopimelate decarboxylase
Displaying items 1-30 of 42 in total

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