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L3_063_368G1_scaffold_1609

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_1609_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(272..562)
DNA (291bp) protein (97aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3L0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05541.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_1609_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(559..1674)
DNA (1116bp) protein (372aa)
DNA replication and repair protein RecF n=7 Tax=Bacteroides RepID=RECF_BACV8
DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_063_368G1_scaffold_1609_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1827..2504
DNA (678bp) protein (226aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3K8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66680.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_063_368G1_scaffold_1609_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2597..3103
DNA (507bp) protein (169aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
6,7-dimethyl-8-ribityllumazine synthase n=7 Tax=Bacteroides RepID=RISB_BACV8
ribH; 6,7-dimethyl-8-ribityllumazine synthase
L3_063_368G1_scaffold_1609_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3404..4108
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L3K6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40270.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_368G1_scaffold_1609_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4331..4624)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L3K5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05536.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_1609_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4778..5536)
DNA (759bp) protein (253aa)
Exodeoxyribonuclease n=6 Tax=Bacteroides RepID=A6L3K4_BACV8
exodeoxyribonuclease
Exodeoxyribonuclease III (Xth) {ECO:0000313|EMBL:EOS05535.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_1609_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5697..6062)
DNA (366bp) protein (122aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L3K3_BACV8
secG; preprotein translocase subunit SecG
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EIY82567.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_368G1_scaffold_1609_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6068..6820)
DNA (753bp) protein (251aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L3K2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40266.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_368G1_scaffold_1609_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6837..7364)
DNA (528bp) protein (176aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3K1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82569.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_368G1_scaffold_1609_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7351..8616)
DNA (1266bp) protein (422aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=A6L3K0_BACV8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABR40264.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_368G1_scaffold_1609_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8783..10090)
DNA (1308bp) protein (436aa)
Myo-inositol-1-phosphate synthase n=7 Tax=Bacteroides RepID=A6L3J9_BACV8
myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:ABR40263.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_368G1_scaffold_1609_13
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10226..11122
DNA (897bp) protein (299aa)
Kinase, PfkB family n=5 Tax=Bacteroides RepID=C6Z668_9BACE
ribokinase
Ribokinase {ECO:0000313|EMBL:EFV66671.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_063_368G1_scaffold_1609_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11176..12375)
DNA (1200bp) protein (400aa)
Fucose permease n=7 Tax=Bacteroides RepID=A6L3J7_BACV8
fucose permease
H+ symporter permease {ECO:0000313|EMBL:KDS56674.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_063_368G1_scaffold_1609_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12382..13104)
DNA (723bp) protein (241aa)
HAD hydrolase, family IA, variant 3 n=5 Tax=root RepID=C6Z666_9BACE
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:KDS56675.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
HAD family hydrolase
L3_063_368G1_scaffold_1609_16
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13109..14080)
DNA (972bp) protein (324aa)
Transmembrane protein n=2 Tax=Bacteroides RepID=E5UW21_9BACE
Transmembrane protein {ECO:0000313|EMBL:EFV66668.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
transmembrane protein
L3_063_368G1_scaffold_1609_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14107..15057)
DNA (951bp) protein (317aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z664_9BACE
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:KDS56677.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_063_368G1_scaffold_1609_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15065..15916)
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P236_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS30450.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_063_368G1_scaffold_1609_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15936..16646)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P0A6_9BACE
MobA-like NTP transferase domain protein {ECO:0000313|EMBL:KDS56679.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
nucleoside-diphosphate-sugar pyrophosphorylase
L3_063_368G1_scaffold_1609_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16688..17788)
DNA (1101bp) protein (367aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=5 Tax=Bacteroides RepID=C6Z661_9BACE
4-hydroxythreonine-4-phosphate dehydrogenase
L3_063_368G1_scaffold_1609_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17815..18879)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9A4B6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82580.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_063_368G1_scaffold_1609_22
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18905..19378)
DNA (474bp) protein (158aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
Probable dual-specificity RNA methyltransferase RlmN n=7 Tax=Bacteroides RepID=RLMN_BACV8
ribosomal RNA large subunit methyltransferase N
L3_063_368G1_scaffold_1609_23
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19369..19833)
DNA (465bp) protein (155aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I9R8_9BACE
ribosomal RNA large subunit methyltransferase N
L3_063_368G1_scaffold_1609_24
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19920..22391
DNA (2472bp) protein (824aa)
Uncharacterized protein n=3 Tax=root RepID=R6HRL8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23669.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
glycosyl transferase
L3_063_368G1_scaffold_1609_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22448..23764
DNA (1317bp) protein (439aa)
Amidase enhancer n=6 Tax=Bacteroides RepID=A6L3I7_BACV8
amidase
Amidase enhancer {ECO:0000313|EMBL:CDF18386.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_063_368G1_scaffold_1609_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23822..25096
DNA (1275bp) protein (425aa)
Beta-lactamase induction signal transducer n=2 Tax=Bacteroides vulgatus RepID=A6L3I6_BACV8
beta-lactamase induction signal transducer
Beta-lactamase induction signal transducer {ECO:0000313|EMBL:ABR40250.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying 26 items

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