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L3_063_368G1_scaffold_1627

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_1627_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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247..663
DNA (417bp) protein (139aa)
Conserved domain protein n=2 Tax=Bacteroides RepID=D4V5W6_BACVU
Conserved domain protein {ECO:0000313|EMBL:CDF18657.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_063_368G1_scaffold_1627_2
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(915..2225)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z3J3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV68628.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_063_368G1_scaffold_1627_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2397..3269)
DNA (873bp) protein (291aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=7 Tax=Bacteroides RepID=A6KXM4_BACV8
L3_063_368G1_scaffold_1627_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3388..4104
DNA (717bp) protein (239aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Pyridoxine 5'-phosphate synthase n=8 Tax=root RepID=PDXJ_BACV8
pyridoxine 5'-phosphate synthase
L3_063_368G1_scaffold_1627_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4101..4817
DNA (717bp) protein (239aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=7 Tax=Bacteroides RepID=C6Z3J0_9BACE
biopolymer transport protein ExbB
Biopolymer transporter ExbB {ECO:0000313|EMBL:EOR98142.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_1627_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4866..5243
DNA (378bp) protein (126aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KXM1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY78003.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_368G1_scaffold_1627_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5253..6146
DNA (894bp) protein (298aa)
TonB family domain-containing protein n=2 Tax=Bacteroides RepID=I9IW23_BACVU
TonB family C-terminal domain protein {ECO:0000313|EMBL:KDS52999.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
TonB-like protein
L3_063_368G1_scaffold_1627_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6150..6701
DNA (552bp) protein (184aa)
DJ-1 family protein n=4 Tax=Bacteroides vulgatus RepID=D4V5X4_BACVU
ThiJ family intracellular protease
DJ-1 family protein {ECO:0000313|EMBL:KDS24461.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_063_368G1_scaffold_1627_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6698..7357
DNA (660bp) protein (220aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=3 Tax=Bacteroides RepID=C6Z3I6_9BACE
L3_063_368G1_scaffold_1627_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7359..9455
DNA (2097bp) protein (699aa)
ATP-dependent DNA helicase RecG n=4 Tax=Bacteroides RepID=C6Z3I5_9BACE
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EIY78007.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
ATP-dependent DNA helicase RecG
L3_063_368G1_scaffold_1627_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9676..10140
DNA (465bp) protein (155aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Nucleoside diphosphate kinase n=7 Tax=Bacteroides RepID=A6KXL6_BACV8
ndk; nucleoside diphosphate kinase
L3_063_368G1_scaffold_1627_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10163..11053
DNA (891bp) protein (297aa)
Peptidase, M23 family n=6 Tax=Bacteroides RepID=C6Z3I3_9BACE
LysM domain protein {ECO:0000313|EMBL:KDS24477.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
peptidase
L3_063_368G1_scaffold_1627_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11167..11709
DNA (543bp) protein (181aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KXL4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS24441.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_063_368G1_scaffold_1627_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11699..13000
DNA (1302bp) protein (434aa)
DoxX family protein n=3 Tax=root RepID=C6Z3I1_9BACE
hypothetical protein
DoxX family protein {ECO:0000313|EMBL:KDS24498.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_063_368G1_scaffold_1627_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13031..13786
DNA (756bp) protein (252aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Triosephosphate isomerase n=7 Tax=Bacteroides RepID=TPIS_BACV8
L3_063_368G1_scaffold_1627_16
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13892..14350
DNA (459bp) protein (153aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6KXL1_BACV8
hypothetical protein
Sporulation and cell division repeat protein {ECO:0000313|EMBL:EET15438.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_063_368G1_scaffold_1627_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14355..14948
DNA (594bp) protein (198aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
GTP cyclohydrolase 1 n=8 Tax=Bacteroides RepID=A6KXL0_BACV8
L3_063_368G1_scaffold_1627_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14961..15854)
DNA (894bp) protein (298aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
DNA primase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P2Z8_9BACE
DNA primase
L3_063_368G1_scaffold_1627_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15902..16798)
DNA (897bp) protein (299aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
DNA primase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H2E4_BACVU
DNA primase
L3_063_368G1_scaffold_1627_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16876..17877)
DNA (1002bp) protein (334aa)
Malate dehydrogenase n=7 Tax=Bacteroides RepID=A6KXK8_BACV8
malate dehydrogenase
Malate dehydrogenase {ECO:0000313|EMBL:EOR98157.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_1627_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18121..18411)
DNA (291bp) protein (97aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6KXK7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY78017.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_368G1_scaffold_1627_22
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18422..19009)
DNA (588bp) protein (196aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z3H4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV68647.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_063_368G1_scaffold_1627_23
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19039..19287)
DNA (249bp) protein (83aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=R7P2W5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18677.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_063_368G1_scaffold_1627_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19304..19423)
DNA (120bp) protein (40aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UM62_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR98161.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying 24 items

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