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L3_063_368G1_scaffold_1652

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_1652_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(230..1960)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P253_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18368.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_063_368G1_scaffold_1652_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1984..5145)
DNA (3162bp) protein (1054aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HWG8_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS56704.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_063_368G1_scaffold_1652_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5419..5865)
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05499.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_1652_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5877..6254)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L3H1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40235.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_368G1_scaffold_1652_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6299..6850)
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=5 Tax=Bacteroides RepID=C6Z642_9BACE
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFV66645.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
RNA polymerase sigma70 factor
L3_063_368G1_scaffold_1652_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6884..7711)
DNA (828bp) protein (276aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Ribonuclease Z n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VEA4_BACVU
ribonuclease Z
L3_063_368G1_scaffold_1652_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7884..8330)
DNA (447bp) protein (149aa)
Cold-shock DNA-binding domain protein n=7 Tax=Bacteroides RepID=C6Z644_9BACE
cold shock protein, DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05503.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_1652_8
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8580..10376)
DNA (1797bp) protein (599aa)
30S ribosomal protein S1 n=6 Tax=Bacteroides RepID=A6L3H5_BACV8
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:AII62724.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_063_368G1_scaffold_1652_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10410..10547)
DNA (138bp) protein (46aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UML6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82596.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_368G1_scaffold_1652_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10573..12237
DNA (1665bp) protein (555aa)
Two-component system sensor histidine kinase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P093_9BACE
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CDF18376.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
two-component system sensor histidine kinase
L3_063_368G1_scaffold_1652_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12234..12935)
DNA (702bp) protein (234aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82594.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_368G1_scaffold_1652_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12939..13775)
DNA (837bp) protein (279aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VEA9_BACVU
murQ; N-acetylmuramic acid 6-phosphate etherase
L3_063_368G1_scaffold_1652_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13772..14611)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VEB0_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG15824.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_063_368G1_scaffold_1652_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14767..15552)
DNA (786bp) protein (262aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VEB1_BACVU
Response regulator receiver domain protein {ECO:0000313|EMBL:EFG15825.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
two-component system response regulator
L3_063_368G1_scaffold_1652_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15545..15727)
DNA (183bp) protein (61aa)
Histidine kinase n=7 Tax=Bacteroides RepID=C6Z651_9BACE
two-component system sensor kinase
Uncharacterized protein {ECO:0000313|EMBL:EOS05511.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_063_368G1_scaffold_1652_16
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16640..16987
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R8B9_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY38103.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L3_063_368G1_scaffold_1652_17
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16996..17199
DNA (204bp) protein (68aa)
MATE efflux family protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MNN2_9BACE
MATE efflux family protein {ECO:0000313|EMBL:CDC01268.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
MATE efflux family protein
L3_063_368G1_scaffold_1652_18
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17224..17442
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=F0R8B7_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC01267.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
L3_063_368G1_scaffold_1652_19
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17461..17718
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=F0R8B6_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY38100.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L3_063_368G1_scaffold_1652_20
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17723..18136
DNA (414bp) protein (138aa)
PcfK-like protein n=1 Tax=Bacteroides barnesiae RepID=UPI00036AE7AD
Uncharacterized protein {ECO:0000313|EMBL:CDC01265.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
PcfK-like protein
L3_063_368G1_scaffold_1652_21
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18138..19418
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MZ70_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC01264.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
hypothetical protein
L3_063_368G1_scaffold_1652_22
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19445..19702
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B0U4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDC01263.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
hypothetical protein
L3_063_368G1_scaffold_1652_23
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19715..19936
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6NU82_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC01262.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
hypothetical protein
L3_063_368G1_scaffold_1652_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20079..20711)
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L3I2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66656.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_063_368G1_scaffold_1652_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20737..21294)
DNA (558bp) protein (186aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L3I3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82586.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_368G1_scaffold_1652_26
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21528..22082)
DNA (555bp) protein (185aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3I4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18384.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Displaying 26 items

View Taxonomy