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L3_063_368G1_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_174_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(105..1040)
DNA (936bp) protein (312aa)
tagatose-6-phosphate kinase (EC:2.7.1.144)
Putative tagatose-6-phosphate kinase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGP6_9ACTN
1-phosphofructokinase {ECO:0000313|EMBL:KGI74238.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_063_368G1_scaffold_174_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1380..1904)
DNA (525bp) protein (175aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=2 Tax=Collinsella RepID=A4E8Z5_9ACTN
Galactose-6-phosphate isomerase subunit lacB {ECO:0000313|EMBL:KGI74240.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
galactose-6-phosphate isomerase subunit LacB
L3_063_368G1_scaffold_174_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1968..2396)
DNA (429bp) protein (143aa)
galactose-6-phosphate isomerase subunit LacA (EC:5.3.1.26)
Putative galactose-6-phosphate isomerase, LacA subunit n=2 Tax=Collinsella RepID=A4E8Z4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74241.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_063_368G1_scaffold_174_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2704..3735)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8Z2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39737.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_063_368G1_scaffold_174_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3995..4333)
DNA (339bp) protein (113aa)
PTS system, lactose-specific IIa component {ECO:0000313|EMBL:EBA39736.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EBA39736.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS system, lactose-specific IIa component n=2 Tax=Collinsella RepID=A4E8Z1_9ACTN
PTS lactose transporter subunit IIA
L3_063_368G1_scaffold_174_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4548..5552)
DNA (1005bp) protein (335aa)
Transcriptional regulator, LacI family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8Z0_9ACTN
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EBA39735.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LacI family transcriptional regulator
L3_063_368G1_scaffold_174_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5909..7666
DNA (1758bp) protein (586aa)
lacE; PTS system lactose-specific EIICB component (EC:2.7.1.69)
Putative PTS system lactose-specific IIC component n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7S6_9ACTN
Putative PTS system lactose-specific IIC component {ECO:0000313|EMBL:CDA35743.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_063_368G1_scaffold_174_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7733..9172
DNA (1440bp) protein (480aa)
lacG.1; 6-phospho-beta-galactosidase (EC:3.2.1.85)
6-phospho-beta-galactosidase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3M9_9ACTN
6-phospho-beta-galactosidase {ECO:0000313|EMBL:KGI74246.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_063_368G1_scaffold_174_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9356..10357)
DNA (1002bp) protein (334aa)
Transcriptional regulator, LacI family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8Y4_9ACTN
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EBA39729.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LacI family transcriptional regulator
L3_063_368G1_scaffold_174_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10642..12420
DNA (1779bp) protein (593aa)
Putative PTS system, lactose-specific IIC component n=2 Tax=Collinsella RepID=A4E8Y3_9ACTN
Putative PTS system, lactose-specific IIC component {ECO:0000313|EMBL:EBA39728.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS system, lactose-specific IIBC component
L3_063_368G1_scaffold_174_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12496..13917
DNA (1422bp) protein (474aa)
lacG.1; 6-phospho-beta-galactosidase (EC:3.2.1.85)
6-phospho-beta-galactosidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAZ7_9ACTN
6-phospho-beta-galactosidase {ECO:0000313|EMBL:KGI74252.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_063_368G1_scaffold_174_12
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14215..14481
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GD13_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA89831.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_368G1_scaffold_174_13
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14471..14776
DNA (306bp) protein (102aa)
Plasmid stabilization system protein, RelE/ParE family n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GD12_9ACTN
Plasmid stabilization system protein, RelE/ParE family {ECO:0000313|EMBL:EEA89830.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_368G1_scaffold_174_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14975..15370)
DNA (396bp) protein (132aa)
Transcriptional regulator DeoR family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A485_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74253.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
lactose phosphotransferase system transcriptional repressor
L3_063_368G1_scaffold_174_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15533..16105)
DNA (573bp) protein (191aa)
Putative PTS system, lactose-specific IIC component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8X8_9ACTN
Putative PTS system, lactose-specific IIC component {ECO:0000313|EMBL:EBA39723.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS system, lactose-specific IIC component
L3_063_368G1_scaffold_174_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16139..17227)
DNA (1089bp) protein (363aa)
Putative PTS system lactose-specific IIC component n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLG9_9ACTN
Putative PTS system lactose-specific IIC component {ECO:0000313|EMBL:CDA35096.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PTS system, lactose-specific IIBC component
L3_063_368G1_scaffold_174_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17584..18504
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5Z8A3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35095.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PEP phosphonomutase family protein
L3_063_368G1_scaffold_174_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18577..19296
DNA (720bp) protein (240aa)
Transcriptional regulator, GntR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8X6_9ACTN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EBA39721.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transcriptional regulator, GntR family
L3_063_368G1_scaffold_174_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19569..20333)
DNA (765bp) protein (255aa)
Transcriptional regulator DeoR family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A485_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74253.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_063_368G1_scaffold_174_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20540..21592
DNA (1053bp) protein (351aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8X4_9ACTN
L3_063_368G1_scaffold_174_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21916..22398)
DNA (483bp) protein (161aa)
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EBA38565.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EBA38565.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED14_9ACTN
L3_063_368G1_scaffold_174_22
unknown

Not on your lists

22902..23204
DNA (303bp) protein (101aa)

This feature has no annotations

L3_063_368G1_scaffold_174_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23393..23758
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED13_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38564.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_063_368G1_scaffold_174_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23894..24367)
DNA (474bp) protein (158aa)
YhcH/YjgK/YiaL family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4I7_9ACTN
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:CDA36007.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_063_368G1_scaffold_174_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24400..24501)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED11_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38562.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_063_368G1_scaffold_174_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24565..25500)
DNA (936bp) protein (312aa)
tagatose-6-phosphate kinase (EC:2.7.1.144)
Putative tagatose-6-phosphate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED10_9ACTN
Putative tagatose-6-phosphate kinase {ECO:0000313|EMBL:EBA38561.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_063_368G1_scaffold_174_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25560..26441)
DNA (882bp) protein (294aa)
Aldose 1-epimerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHJ9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74258.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aldose-1-epimerase
L3_063_368G1_scaffold_174_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26598..27182
DNA (585bp) protein (195aa)
Flavodoxin n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB24_9ACTN
Flavodoxin {ECO:0000313|EMBL:CDA36010.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_063_368G1_scaffold_174_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27258..28427)
DNA (1170bp) protein (390aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9Y1_9ACTN
L3_063_368G1_scaffold_174_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28545..29711)
DNA (1167bp) protein (389aa)
Sugar isomerase AgaS family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMT9_9ACTN
Sugar isomerase AgaS family {ECO:0000313|EMBL:CDA35651.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
galactosamine 6-phosphate isomerase AgaS
Displaying items 1-30 of 106 in total

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