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L3_063_368G1_scaffold_395

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_395_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(63..944)
DNA (882bp) protein (294aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine kinase n=2 Tax=Collinsella RepID=A4E937_9ACTN
homoserine kinase
L3_063_368G1_scaffold_395_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1148..2710)
DNA (1563bp) protein (521aa)
Threonine synthase {ECO:0000313|EMBL:EBA39783.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EBA39783.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E938_9ACTN
L3_063_368G1_scaffold_395_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2769..4157
DNA (1389bp) protein (463aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Aspartokinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E939_9ACTN
aspartate kinase
L3_063_368G1_scaffold_395_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4332..5357
DNA (1026bp) protein (342aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E940_9ACTN
L3_063_368G1_scaffold_395_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5709..6287
DNA (579bp) protein (193aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7Q9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35723.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_063_368G1_scaffold_395_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6494..7729)
DNA (1236bp) protein (412aa)
Chloride ion channel protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3L0_9ACTN
Chloride ion channel protein {ECO:0000313|EMBL:CDA35722.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
chloride ion channel protein
L3_063_368G1_scaffold_395_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7915..8553)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E942_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39787.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_063_368G1_scaffold_395_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8825..9526
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA50_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35720.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L3_063_368G1_scaffold_395_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9568..12297
DNA (2730bp) protein (910aa)
Efflux ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E944_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74564.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_063_368G1_scaffold_395_10
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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12938..13858
DNA (921bp) protein (307aa)
Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WL34_EGGLE
Uncharacterized protein {ECO:0000313|EMBL:KGI71964.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
XRE family transcriptional regulator
L3_063_368G1_scaffold_395_11
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14306..14635
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GQH4_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL83011.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L3_063_368G1_scaffold_395_12
unknown

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14684..15292
DNA (609bp) protein (203aa)

This feature has no annotations

L3_063_368G1_scaffold_395_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15137..16216)
DNA (1080bp) protein (360aa)
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00197180}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00197180};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E945_9ACTN
L3_063_368G1_scaffold_395_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16368..17822
DNA (1455bp) protein (485aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
M18 family aminopeptidase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E947_9ACTN
aminopeptidase
L3_063_368G1_scaffold_395_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17823..18005
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA47_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35715.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_063_368G1_scaffold_395_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18360..19295)
DNA (936bp) protein (312aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGM1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74560.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L3_063_368G1_scaffold_395_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19421..20308)
DNA (888bp) protein (296aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Methionine aminopeptidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7P8_9ACTN
Map; methionine aminopeptidase
L3_063_368G1_scaffold_395_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20398..21174)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E950_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39795.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
radical SAM domain-containing protein
L3_063_368G1_scaffold_395_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21400..22197
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMY3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35711.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
alpha/beta hydrolase fold protein
L3_063_368G1_scaffold_395_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22409..24289
DNA (1881bp) protein (627aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E952_9ACTN
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EBA39797.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
conserved hypothetical protein
L3_063_368G1_scaffold_395_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24313..24669
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGL8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35709.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Hpt domain.
L3_063_368G1_scaffold_395_22
unknown

Not on your lists

24900..25460
DNA (561bp) protein (187aa)

This feature has no annotations

L3_063_368G1_scaffold_395_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25469..25798
DNA (330bp) protein (110aa)
ITIH5 Inter-alpha-trypsin inhibitor heavy chain H5 n=4 Tax=Bacteria RepID=E5XAR7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73922.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
putative XRE family transcriptional regulator
L3_063_368G1_scaffold_395_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25943..26356
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WFF7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73980.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter related protein
L3_063_368G1_scaffold_395_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26390..26704
DNA (315bp) protein (105aa)
bacitracin ABC transporter ATP-binding protein n=1 Tax=Lachnobacterium bovis RepID=UPI0003B6E427
Uncharacterized protein {ECO:0000313|EMBL:KGI73980.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
putative ABC transporter ATP-binding protein
L3_063_368G1_scaffold_395_26
unknown

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26701..27525
DNA (825bp) protein (275aa)

This feature has no annotations

L3_063_368G1_scaffold_395_27
unknown

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27509..28327
DNA (819bp) protein (273aa)

This feature has no annotations

L3_063_368G1_scaffold_395_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28437..29246)
DNA (810bp) protein (270aa)
Peptidase C26 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E954_9ACTN
Peptidase C26 {ECO:0000313|EMBL:EBA39799.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptidase C26
L3_063_368G1_scaffold_395_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29334..30098)
DNA (765bp) protein (255aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3J6_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35707.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid ABC transporter ATP-binding protein
L3_063_368G1_scaffold_395_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30135..30968)
DNA (834bp) protein (278aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMY0_9ACTN
ABC transporter permease protein {ECO:0000313|EMBL:CDA35706.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid ABC transporter
Displaying items 1-30 of 57 in total

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