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L3_063_368G1_scaffold_1102

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_1102_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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927..3368
DNA (2442bp) protein (814aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7A3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75642.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_063_368G1_scaffold_1102_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3874..5283)
DNA (1410bp) protein (470aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGB5_9ACTN
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDA35564.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L3_063_368G1_scaffold_1102_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5412..6107
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8W8_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EBA40334.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
two component transcriptional regulator, winged helix family
L3_063_368G1_scaffold_1102_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6134..7372
DNA (1239bp) protein (413aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8W7_9ACTN
integral membrane sensor signal transduction histidine kinase
L3_063_368G1_scaffold_1102_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7476..8351
DNA (876bp) protein (292aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A6B3_9ACTN
L3_063_368G1_scaffold_1102_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8416..9144
DNA (729bp) protein (243aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8W5_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EBA40331.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_063_368G1_scaffold_1102_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9148..10572
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJ83_9ACTN
L3_063_368G1_scaffold_1102_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10768..11424
DNA (657bp) protein (219aa)
Chain length determinant protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCS3_9ACTN
Chain length determinant protein {ECO:0000313|EMBL:CDA36660.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
lipopolysaccharide biosynthesis protein
L3_063_368G1_scaffold_1102_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11427..12164
DNA (738bp) protein (246aa)
Capsular exopolysaccharide family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQM3_9ACTN
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDA36661.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
capsular polysaccharide biosynthesis protein
L3_063_368G1_scaffold_1102_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12182..12832
DNA (651bp) protein (217aa)
PHP domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A6B7_9ACTN
PHP domain protein {ECO:0000313|EMBL:CDA36662.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PHP domain-containing protein
L3_063_368G1_scaffold_1102_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12872..13372
DNA (501bp) protein (167aa)
Acetyltransferase GNAT family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAD5_9ACTN
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA36663.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_063_368G1_scaffold_1102_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13575..15599
DNA (2025bp) protein (675aa)
Chaperone protein HtpG n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJ88_9ACTN
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Heat shock protein Hsp90
L3_063_368G1_scaffold_1102_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15996..18812
DNA (2817bp) protein (939aa)
YhgE/Pip domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8V7_9ACTN
YhgE/Pip domain protein {ECO:0000313|EMBL:EBA40323.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_063_368G1_scaffold_1102_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18813..21002
DNA (2190bp) protein (730aa)
YhgE/Pip domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8V6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75657.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_063_368G1_scaffold_1102_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21342..22325
DNA (984bp) protein (328aa)
Putative membrane protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8V5_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EBA40321.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transporter protein
L3_063_368G1_scaffold_1102_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22442..23743
DNA (1302bp) protein (434aa)
amidohydrolase (EC:3.5.1.47)
Amidohydrolase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJA5_9ACTN
Amidohydrolase {ECO:0000313|EMBL:CDA36684.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_063_368G1_scaffold_1102_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23747..24496
DNA (750bp) protein (250aa)
Transporter major facilitator family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A6E4_9ACTN
Transporter major facilitator family protein {ECO:0000313|EMBL:CDA36697.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Sugar phosphate permease
L3_063_368G1_scaffold_1102_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24483..25049
DNA (567bp) protein (189aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8V3_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EBA40319.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Sugar phosphate permease
Displaying 18 items

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