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L3_063_368G1_scaffold_305

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_305_1
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(183..2063)
DNA (1881bp) protein (627aa)
Glycerate kinase {ECO:0000313|EMBL:EEP43690.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EEP43690.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBZ1_9ACTN
L3_063_368G1_scaffold_305_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2480..3088)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBZ2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43691.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
transcriptional regulator, TetR family
L3_063_368G1_scaffold_305_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3353..3907
DNA (555bp) protein (185aa)
LemA family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBZ4_9ACTN
LemA family protein {ECO:0000313|EMBL:EEP43693.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
LemA family protein
L3_063_368G1_scaffold_305_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4100..6193
DNA (2094bp) protein (698aa)
Acyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBZ5_9ACTN
Acyltransferase {ECO:0000313|EMBL:EEP43694.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
peptidoglycan-N-acetylmuramate O-acetyltransferase
L3_063_368G1_scaffold_305_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6224..7465)
DNA (1242bp) protein (414aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBZ6_9ACTN
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:EEP43695.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
natural resistance-associated macrophage protein
L3_063_368G1_scaffold_305_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7481..9361)
DNA (1881bp) protein (627aa)
Putative magnesium transporter n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBZ7_9ACTN
Putative magnesium transporter {ECO:0000313|EMBL:EEP43696.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
MgtE integral membrane protein
L3_063_368G1_scaffold_305_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9672..11057)
DNA (1386bp) protein (462aa)
Polysaccharide deacetylase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBZ8_9ACTN
Polysaccharide deacetylase {ECO:0000313|EMBL:EEP43697.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
polysaccharide deacetylase
L3_063_368G1_scaffold_305_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11103..11900)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBZ9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43698.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_305_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11920..12300)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC00_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43699.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_305_10
unknown

Not on your lists

comp(12484..12894)
DNA (411bp) protein (137aa)

This feature has no annotations

L3_063_368G1_scaffold_305_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13168..15009)
DNA (1842bp) protein (614aa)
Putative ATP synthase F0, A subunit n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC01_9ACTN
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EEP43700.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
carbon starvation protein CstA
L3_063_368G1_scaffold_305_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15306..16037)
DNA (732bp) protein (244aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC02_9ACTN
L3_063_368G1_scaffold_305_13
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16236..17258
DNA (1023bp) protein (341aa)
Acyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC03_9ACTN
Acyltransferase {ECO:0000313|EMBL:EEP43702.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
acetyltransferase, fucose-4-O-acetylase
L3_063_368G1_scaffold_305_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17638..18057)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC04_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43703.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_063_368G1_scaffold_305_15
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18133..19119)
DNA (987bp) protein (329aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC05_9ACTN
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EEP43704.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_305_16
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19337..20383
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC07_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43706.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_063_368G1_scaffold_305_17
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20471..20935)
DNA (465bp) protein (155aa)
Transposase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC08_9ACTN
Transposase {ECO:0000313|EMBL:EEP43707.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_305_18
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21286..24027)
DNA (2742bp) protein (914aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Ribonucleoside-diphosphate reductase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC09_9ACTN
response regulator SirA
L3_063_368G1_scaffold_305_19
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24200..25258
DNA (1059bp) protein (353aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC10_9ACTN
ribonucleotide-diphosphate reductase subunit beta
L3_063_368G1_scaffold_305_20
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25268..26170)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC11_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43710.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_305_21
unknown

Not on your lists

26191..26724
DNA (534bp) protein (178aa)

This feature has no annotations

L3_063_368G1_scaffold_305_22
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27236..29881)
DNA (2646bp) protein (882aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC13_9ACTN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEP43712.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
metallophosphoesterase
L3_063_368G1_scaffold_305_23
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30126..32192)
DNA (2067bp) protein (689aa)
Putative translation elongation factor G n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC14_9ACTN
Putative translation elongation factor G {ECO:0000313|EMBL:EEP43713.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
translation elongation factor 2 (EF-2/EF-G)
L3_063_368G1_scaffold_305_24
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32485..34869)
DNA (2385bp) protein (795aa)
Tetratricopeptide repeat protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC16_9ACTN
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEP43715.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
exopolyphosphatase
L3_063_368G1_scaffold_305_25
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34986..35750)
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC17_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP43716.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_305_26
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35833..36546)
DNA (714bp) protein (238aa)
ABC transporter, permease protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC18_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EEP43717.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
polar amino acid ABC transporter permease
L3_063_368G1_scaffold_305_27
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(36577..37524)
DNA (948bp) protein (316aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC19_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEP43718.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_063_368G1_scaffold_305_28
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37784..39049
DNA (1266bp) protein (422aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EEP43719.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEP43719.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC20_9ACTN
RNA methyltransferase, TrmA family
L3_063_368G1_scaffold_305_29
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(39147..40505)
DNA (1359bp) protein (453aa)
Triacylglycerol lipase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC21_9ACTN
Triacylglycerol lipase {ECO:0000313|EMBL:EEP43720.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
lipase class 3
L3_063_368G1_scaffold_305_30
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(40648..41451)
DNA (804bp) protein (268aa)
Putative hydrolase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC22_9ACTN
Putative hydrolase {ECO:0000313|EMBL:EEP43721.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
PHP domain-containing protein
Displaying items 1-30 of 59 in total

View Taxonomy