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L3_063_368G1_scaffold_827

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_827_1
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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124..753
DNA (630bp) protein (210aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBE0_9ACTN
L3_063_368G1_scaffold_827_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1016..1342
DNA (327bp) protein (109aa)
Transglycosylase SLT domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBE1_9ACTN
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EEP43895.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Lytic transglycosylase catalytic
L3_063_368G1_scaffold_827_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1360..3597
DNA (2238bp) protein (746aa)
UvrABC system protein B n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBE2_9ACTN
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
excinuclease ABC subunit B
L3_063_368G1_scaffold_827_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3743..4318
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBE3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43897.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_063_368G1_scaffold_827_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4491..6149)
DNA (1659bp) protein (553aa)
FAD dependent oxidoreductase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBE5_9ACTN
FAD dependent oxidoreductase {ECO:0000313|EMBL:EEP43899.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
FAD dependent oxidoreductase
L3_063_368G1_scaffold_827_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6142..7557)
DNA (1416bp) protein (472aa)
Flavoprotein family protein (Fragment) n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBE6_9ACTN
Flavoprotein family protein {ECO:0000313|EMBL:EEP43900.1}; Flags: Fragment;; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_827_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7559..8401)
DNA (843bp) protein (281aa)
Nucleotide-binding protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBE8_9ACTN
Nucleotide-binding protein {ECO:0000313|EMBL:EEP43849.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ParA/MinD-like ATPase
L3_063_368G1_scaffold_827_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8649..9398
DNA (750bp) protein (250aa)
Bile acid 7-dehydroxylase 1/3 {ECO:0000313|EMBL:EEP43851.1}; EC=1.17.99.5 {ECO:0000313|EMBL:EEP43851.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100 1.1.1.159)
Bile acid 7-dehydroxylase 1/3 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBF0_9ACTN
L3_063_368G1_scaffold_827_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9657..12533
DNA (2877bp) protein (959aa)
UvrABC system protein A n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBF1_9ACTN
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
excinuclease ABC subunit A
L3_063_368G1_scaffold_827_10
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12526..13023
DNA (498bp) protein (166aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBF2_9ACTN
ybaK/ebsC protein
L3_063_368G1_scaffold_827_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13129..14310
DNA (1182bp) protein (394aa)
NlpC/P60 family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBF3_9ACTN
NlpC/P60 family protein {ECO:0000313|EMBL:EEP43854.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
NLP/P60 protein
L3_063_368G1_scaffold_827_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14406..16319
DNA (1914bp) protein (638aa)
Putative integral membrane protein MviN n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBF4_9ACTN
Putative integral membrane protein MviN {ECO:0000313|EMBL:EEP43855.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
virulence factor MVIN family protein
L3_063_368G1_scaffold_827_13
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16415..17653)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBF5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43856.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ATP-grasp protein
L3_063_368G1_scaffold_827_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17875..18885
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBF6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43857.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_827_15
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19003..20988
DNA (1986bp) protein (662aa)
UvrABC system protein C n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBF7_9ACTN
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Excinuclease ABC subunit C
L3_063_368G1_scaffold_827_16
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21287..22897
DNA (1611bp) protein (537aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBF9_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEP43860.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
family 5 extracellular solute-binding protein
L3_063_368G1_scaffold_827_17
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22957..23985
DNA (1029bp) protein (343aa)
ABC transporter, permease protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBG0_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EEP43861.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
binding-protein-dependent transport system inner membrane protein
L3_063_368G1_scaffold_827_18
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23989..26043
DNA (2055bp) protein (685aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBG1_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP43862.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ABC transporter-like protein
L3_063_368G1_scaffold_827_19
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26044..26862
DNA (819bp) protein (273aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBG2_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP43863.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ABC transporter-like protein
L3_063_368G1_scaffold_827_20
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27020..27940
DNA (921bp) protein (307aa)
Dihydrodipicolinate synthetase family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBG3_9ACTN
Dihydrodipicolinate synthetase family {ECO:0000313|EMBL:EEP43864.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
dihydrodipicolinate synthetase
L3_063_368G1_scaffold_827_21
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27953..28918
DNA (966bp) protein (322aa)
ROK family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBG4_9ACTN
ROK family protein {ECO:0000313|EMBL:EEP43865.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
transcriptional regulator/sugar kinase
L3_063_368G1_scaffold_827_22
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28997..29677
DNA (681bp) protein (227aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBG5_9ACTN
L3_063_368G1_scaffold_827_23
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29896..30846
DNA (951bp) protein (317aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EEP43820.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EEP43820.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBG9_9ACTN
L3_063_368G1_scaffold_827_24
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30982..31902
DNA (921bp) protein (307aa)
UPF0042 nucleotide-binding protein COLINT_03423 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBH0_9ACTN
Nucleotide-binding protein COLINT_03423 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_827_25
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31905..32960
DNA (1056bp) protein (352aa)
Putative gluconeogenesis factor n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBH1_9ACTN
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_827_26
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32961..33908
DNA (948bp) protein (316aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBH2_9ACTN
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_368G1_scaffold_827_27
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34107..34646
DNA (540bp) protein (180aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBH3_9ACTN
Displaying 27 items

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