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L3_063_368G1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_12_1
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..120)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YP58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59327.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_063_368G1_scaffold_12_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(141..632)
DNA (492bp) protein (164aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87634.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
L3_063_368G1_scaffold_12_3
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(792..3431)
DNA (2640bp) protein (880aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y634_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59943.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_063_368G1_scaffold_12_4
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3777..4802)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Lachnospiraceae RepID=E9RSN7_9FIRM
L3_063_368G1_scaffold_12_5
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4783..5409)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y6Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59941.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
RDD domain-containing protein
L3_063_368G1_scaffold_12_6
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5450..6469)
DNA (1020bp) protein (340aa)
sppA; putative signal peptide peptidase SppA (EC:3.4.21.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RSN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75638.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_063_368G1_scaffold_12_7
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6668..9964)
DNA (3297bp) protein (1099aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z786_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59939.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_063_368G1_scaffold_12_8
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9980..10795)
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RS48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76201.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_063_368G1_scaffold_12_9
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11170..13587)
DNA (2418bp) protein (806aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=3 Tax=Lachnospiraceae RepID=E9RS47_9FIRM
L3_063_368G1_scaffold_12_10
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13723..14742)
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Lachnospiraceae RepID=E9RS46_9FIRM
L3_063_368G1_scaffold_12_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15140..15616)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87643.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Isopentenyldiphosphate isomerase
L3_063_368G1_scaffold_12_12
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15676..16065)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Z782_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87644.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_12_13
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16142..16600)
DNA (459bp) protein (153aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RS33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59933.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L3_063_368G1_scaffold_12_14
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16682..17515)
DNA (834bp) protein (278aa)
YihY family inner membrane protein n=2 Tax=Lachnospiraceae RepID=S2YQW5_9FIRM
YihY family inner membrane protein {ECO:0000313|EMBL:EPD59932.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Predicted membrane protein
L3_063_368G1_scaffold_12_15
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17658..18980)
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87647.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
SpoIID/LytB domain-containing protein
L3_063_368G1_scaffold_12_16
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19334..21655)
DNA (2322bp) protein (774aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RS30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87648.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_063_368G1_scaffold_12_17
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21670..22773)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RS29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87649.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_12_18
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22811..23755)
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87650.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ATPase
L3_063_368G1_scaffold_12_19
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23922..24293
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y6X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87651.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Predicted transcriptional regulators
L3_063_368G1_scaffold_12_20
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24296..25144
DNA (849bp) protein (283aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YCD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87652.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC-type multidrug transport system, ATPase component
L3_063_368G1_scaffold_12_21
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25144..25797
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Z772_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87653.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_12_22
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25813..25929
DNA (117bp) protein (39aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2Y612_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65562.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_063_368G1_scaffold_12_23
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26156..26494
DNA (339bp) protein (113aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YM32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65563.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_063_368G1_scaffold_12_24
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26793..27236
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87656.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
GNAT family acetyltransferase
L3_063_368G1_scaffold_12_25
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27356..27664
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RS16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76169.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_063_368G1_scaffold_12_26
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27756..28622
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Z767_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87122.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
AraC family transcriptional regulator
L3_063_368G1_scaffold_12_27
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28610..30835)
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y606_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76167.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
glycoside hydrolase family protein
L3_063_368G1_scaffold_12_28
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31007..32263)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RS13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76166.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
oxidoreductase
L3_063_368G1_scaffold_12_29
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32393..34081)
DNA (1689bp) protein (563aa)
Phosphoenolpyruvate carboxykinase (ATP) {ECO:0000256|SAAS:SAAS00051801}; EC=4.1.1.49 {ECO:0000256|SAAS:SAAS00051801};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y6W4_9FIRM
phosphoenolpyruvate carboxykinase
L3_063_368G1_scaffold_12_30
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34336..35307)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RS05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76158.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Glycosyltransferase
Displaying items 1-30 of 253 in total

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