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L3_063_368G1_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_115_1
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(448..612)
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RTY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65135.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
DNA-binding helix-turn-helix protein
L3_063_368G1_scaffold_115_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(884..1483)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90413.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
L3_063_368G1_scaffold_115_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1505..1756)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90413.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
L3_063_368G1_scaffold_115_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1753..1890)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YLA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65136.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_063_368G1_scaffold_115_5
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1915..2103)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90414.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_115_6
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2759..3226)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Streptococcus sanguinis SK1056 RepID=F3UC29_STRSA
Uncharacterized protein {ECO:0000313|EMBL:EGJ39560.1}; TaxID=888820 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sanguinis SK1056.;"
hypothetical protein
L3_063_368G1_scaffold_115_7
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3282..4184)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JP66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32937.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
helix-turn-helix type 11 domain-containing protein
L3_063_368G1_scaffold_115_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4432..4629)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=B6FQA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22571.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_063_368G1_scaffold_115_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5072..5320
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WX07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67142.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L3_063_368G1_scaffold_115_10
unknown

Not on your lists

comp(5643..5798)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_063_368G1_scaffold_115_11
unknown

Not on your lists

comp(6069..6233)
DNA (165bp) protein (55aa)

This feature has no annotations

L3_063_368G1_scaffold_115_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6265..6726)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I857_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15344.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_063_368G1_scaffold_115_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6732..7547)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2E7J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90287.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_063_368G1_scaffold_115_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7560..8354)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76753.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_115_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8347..9273)
DNA (927bp) protein (309aa)
ABC-type multidrug transport system, ATPase component n=8 Tax=Clostridiales RepID=D4LWS4_9FIRM
lantibiotic ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EHE99968.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_063_368G1_scaffold_115_16
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9409..10326)
DNA (918bp) protein (306aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YAH3_9FIRM
Signal transduction histidine kinase
L3_063_368G1_scaffold_115_17
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10332..11027)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z5C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59304.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_063_368G1_scaffold_115_18
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11340..11660)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y4A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59303.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Signal transduction histidine kinase
L3_063_368G1_scaffold_115_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11881..12075)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P29 RepID=T4N8L0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDC23093.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_063_368G1_scaffold_115_20
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12402..13169)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZML0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65139.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_063_368G1_scaffold_115_21
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13186..13911)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y4Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59301.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_063_368G1_scaffold_115_22
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13908..14672)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YLA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65141.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC-type multidrug transport system, ATPase component
L3_063_368G1_scaffold_115_23
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14828..15529
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z595_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65142.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_063_368G1_scaffold_115_24
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15534..16916
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y499_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59298.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Signal transduction histidine kinase
L3_063_368G1_scaffold_115_25
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16970..17074)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YP35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59297.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_063_368G1_scaffold_115_26
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17071..19287)
DNA (2217bp) protein (739aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y4Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59296.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_063_368G1_scaffold_115_27
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19277..20044)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90416.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_063_368G1_scaffold_115_28
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20154..21167)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z5B8_9FIRM
Signal transduction histidine kinase
L3_063_368G1_scaffold_115_29
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21164..21832)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90418.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_063_368G1_scaffold_115_30
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21905..24118)
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZMM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65149.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC-type transport system, involved in lipoprotein release, permease component
Displaying items 1-30 of 124 in total

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