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L3_063_368G1_scaffold_510

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_510_1
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..577)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZF33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62589.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
MobA/MobL family.
L3_063_368G1_scaffold_510_2
unknown

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comp(735..869)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_063_368G1_scaffold_510_3
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(920..2296)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YK33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62590.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Predicted P-loop ATPase and inactivated derivatives
L3_063_368G1_scaffold_510_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2235..2912)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XIB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18947.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
DNA primase (bacterial type)
L3_063_368G1_scaffold_510_5
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2984..4531)
DNA (1548bp) protein (516aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K8A5_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDB67334.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_063_368G1_scaffold_510_6
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4524..6212)
DNA (1689bp) protein (563aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Eubacterium sp. CAG:252 RepID=R6JWZ7_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDB67333.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_063_368G1_scaffold_510_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6223..7848)
DNA (1626bp) protein (542aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KV00_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL11190.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_063_368G1_scaffold_510_8
unknown

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comp(7864..8139)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_063_368G1_scaffold_510_9
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8593..9411
DNA (819bp) protein (273aa)
Putative transcriptional regulator n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5ATY7_EUBCE
Putative transcriptional regulator {ECO:0000313|EMBL:EIM57260.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
Predicted transcriptional regulators
L3_063_368G1_scaffold_510_10
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9595..10122)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D294_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74360.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_063_368G1_scaffold_510_11
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10252..10449)
DNA (198bp) protein (66aa)
Predicted transcriptional regulator n=1 Tax=Dorea sp. CAG:105 RepID=R5DEM5_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CCX74361.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Predicted transcriptional regulator
L3_063_368G1_scaffold_510_12
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10562..11410)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RUT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75054.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
DNA or RNA helicases of superfamily II
L3_063_368G1_scaffold_510_13
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11537..11740)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RUT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75055.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_063_368G1_scaffold_510_14
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12034..12954)
DNA (921bp) protein (307aa)
Elongation factor Ts n=2 Tax=Lachnospiraceae RepID=F3AKS2_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
translation elongation factor Ts (EF-Ts)
L3_063_368G1_scaffold_510_15
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13034..13786)
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=4 Tax=Lachnospiraceae RepID=E9RUT6_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
SSU ribosomal protein S2P
L3_063_368G1_scaffold_510_16
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14054..14569)
DNA (516bp) protein (172aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=3 Tax=Lachnospiraceae RepID=S2Y5X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86090.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_510_17
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14747..15280)
DNA (534bp) protein (178aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2 1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Lachnospiraceae RepID=E9RUT8_9FIRM
L3_063_368G1_scaffold_510_18
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15240..17504)
DNA (2265bp) protein (755aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Lachnospiraceae RepID=S2Y5B2_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EPD59633.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_063_368G1_scaffold_510_19
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17587..18360)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YK84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86093.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC-type uncharacterized transport system, ATPase component
L3_063_368G1_scaffold_510_20
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18353..19234)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YBL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59635.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
ABC-type uncharacterized transport system, permease component
L3_063_368G1_scaffold_510_21
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19262..20281)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2Y5Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64881.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC-type uncharacterized transport system, periplasmic component
L3_063_368G1_scaffold_510_22
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20358..20699)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YQ55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86096.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_510_23
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20881..22329)
DNA (1449bp) protein (483aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86097.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
extracellular solute-binding protein
L3_063_368G1_scaffold_510_24
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22350..23153)
DNA (804bp) protein (268aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RUU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75065.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
sugar permease
L3_063_368G1_scaffold_510_25
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23147..24040)
DNA (894bp) protein (298aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YBM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64877.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC transporter permease
L3_063_368G1_scaffold_510_26
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24077..25957)
DNA (1881bp) protein (627aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86100.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_510_27
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25957..27237)
DNA (1281bp) protein (427aa)
PTS system protein n=2 Tax=Lachnospiraceae RepID=F3AKT5_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
celB2; PTS family oligomeric beta-glucoside porter component IIC
L3_063_368G1_scaffold_510_28
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27508..28713
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86102.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
transcriptional regulator/sugar kinase
L3_063_368G1_scaffold_510_29
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28734..29813
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Z6F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86103.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
peptidase family protein
L3_063_368G1_scaffold_510_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29918..30376)
DNA (459bp) protein (153aa)
Peroxiredoxin (EC:1.11.1.15)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z4G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86104.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Displaying items 1-30 of 53 in total

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