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L3_063_368G1_scaffold_876

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_876_1
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(114..506)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=4 Tax=Lachnospiraceae RepID=E9RZ74_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
30S ribosomal protein S9
L3_063_368G1_scaffold_876_2
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(533..961)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XRL2_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
LSU ribosomal protein L13P
L3_063_368G1_scaffold_876_3
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1346..2653
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YTB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD54984.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Glycosidases
L3_063_368G1_scaffold_876_4
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2801..3310)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XY83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD54985.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_063_368G1_scaffold_876_5
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3367..3960)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XSJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD54986.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
HD domain-containing protein
L3_063_368G1_scaffold_876_6
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3976..5199)
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=3 Tax=Lachnospiraceae RepID=E9RZ78_9FIRM
L3_063_368G1_scaffold_876_7
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5186..5725)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YB65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD61818.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
isopentenyldiphosphate isomerase
L3_063_368G1_scaffold_876_8
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6312..7217)
DNA (906bp) protein (302aa)
Tagatose-6-phosphate kinase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XY87_9FIRM
Ribokinase {ECO:0000313|EMBL:EPD54990.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
ribokinase
L3_063_368G1_scaffold_876_9
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7237..8223)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YHR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD61820.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
bacterial regulatory s, lacI family protein
L3_063_368G1_scaffold_876_10
unknown

Not on your lists

comp(8339..8434)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_063_368G1_scaffold_876_11
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8448..9191)
DNA (744bp) protein (248aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RZ82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC73540.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Uncharacterized protein involved in copper resistance
L3_063_368G1_scaffold_876_12
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9325..10767)
DNA (1443bp) protein (481aa)
PTS system protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3APZ1_9FIRM
PTS system protein {ECO:0000313|EMBL:EGG88567.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
PTS system N-acetylglucosamine-specific transporter subunit IIBC
L3_063_368G1_scaffold_876_13
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10878..11369)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3APZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88568.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
PTS system, beta-glucosides-specific IIA component / PTS system, beta-glucosides-specific IIB component / PTS system, beta-glucosides-specific IIC component
L3_063_368G1_scaffold_876_14
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11380..12420)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3APZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88569.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_876_15
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12434..14053)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=3 Tax=Lachnospiraceae RepID=F3APZ4_9FIRM
L3_063_368G1_scaffold_876_16
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14074..14331)
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RZ87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC73545.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Phosphotransferase System HPr (HPr) Family
L3_063_368G1_scaffold_876_17
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14429..15256)
DNA (828bp) protein (276aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RZ88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC73546.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
transcriptional antiterminator, BglG family
L3_063_368G1_scaffold_876_18
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15527..16549)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YC51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD54997.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
L3_063_368G1_scaffold_876_19
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16616..19105)
DNA (2490bp) protein (830aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3APZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88574.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_876_20
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19108..20112)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YTD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD54999.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_063_368G1_scaffold_876_21
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20134..21027)
DNA (894bp) protein (298aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XY95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55000.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_063_368G1_scaffold_876_22
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21143..21610)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YVW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD61832.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_063_368G1_scaffold_876_23
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21637..23676)
DNA (2040bp) protein (680aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AQ02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88578.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_876_24
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23673..24983)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XRM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88579.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_876_25
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25016..25894)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YTE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88580.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_876_26
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25919..26719)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XYA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55005.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_063_368G1_scaffold_876_27
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26745..26975)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YVX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD61837.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_063_368G1_scaffold_876_28
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27003..27320)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AQ07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88583.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_876_29
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27369..27506)
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XRN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88584.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_876_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27508..29496)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YTE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88585.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
Displaying items 1-30 of 33 in total

View Taxonomy