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L3_063_368G1_scaffold_1643

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_368G1_scaffold_1643_1
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1828
DNA (1827bp) protein (609aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y832_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88200.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Fe-S oxidoreductase
L3_063_368G1_scaffold_1643_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1809..2507
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88199.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_1643_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2520..3725
DNA (1206bp) protein (402aa)
Ribonucleases G and E (EC:3.1.26.-)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88198.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_1643_4
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3744..4247
DNA (504bp) protein (168aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=unclassified Lachnospiraceae RepID=E9RSF8_9FIRM
ybaK/ebsC protein
L3_063_368G1_scaffold_1643_5
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4353..4940
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YT60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65255.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_063_368G1_scaffold_1643_6
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5174..6217
DNA (1044bp) protein (348aa)
Protein RecA n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIW7_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
protein RecA
L3_063_368G1_scaffold_1643_7
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6221..6838
DNA (618bp) protein (206aa)
Regulatory protein RecX n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIW6_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_063_368G1_scaffold_1643_8
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6964..8514
DNA (1551bp) protein (517aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Ribonuclease Y n=4 Tax=Lachnospiraceae RepID=E9RSG3_9FIRM
metal dependent phosphohydrolase
L3_063_368G1_scaffold_1643_9
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8681..9214
DNA (534bp) protein (178aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.13)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RSG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88192.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_1643_10
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9355..9900
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88191.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_1643_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9979..11316)
DNA (1338bp) protein (446aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88190.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_063_368G1_scaffold_1643_12
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11371..11913
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RSG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75937.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
transcriptional regulator, BadM/Rrf2 family
L3_063_368G1_scaffold_1643_13
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11926..13110
DNA (1185bp) protein (395aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIW0_9FIRM
L3_063_368G1_scaffold_1643_14
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13203..13643
DNA (441bp) protein (147aa)
FeS cluster assembly scaffold protein NifU n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIV9_9FIRM
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:EGG88187.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L3_063_368G1_scaffold_1643_15
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13693..14766
DNA (1074bp) protein (358aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIV8_9FIRM
L3_063_368G1_scaffold_1643_16
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14812..15612
DNA (801bp) protein (267aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AIV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88185.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_368G1_scaffold_1643_17
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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15741..15818
DNA (78bp) protein (26aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GMK1_9FIRM
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:CDB00843.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Displaying 17 items

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