ggKbase home page

L3_068_000G1_scaffold_1057

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_1057_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(673..1824)
DNA (1152bp) protein (384aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
N-acetylglucosamine-6-phosphate deacetylase n=13 Tax=Bacteroides RepID=E1WR66_BACF6
putative N-acetylglucosamine-6-phosphate deacetylase
L3_068_000G1_scaffold_1057_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1981..2658
DNA (678bp) protein (226aa)
Two-component system response regulator n=11 Tax=Bacteroides RepID=Q64SP3_BACFR
two-component system response regulator
Transcriptional regulatory family protein {ECO:0000313|EMBL:EXZ43917.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_068_000G1_scaffold_1057_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2676..3974
DNA (1299bp) protein (433aa)
Two-component system sensor histidine kinase n=9 Tax=Bacteroides RepID=Q64SP2_BACFR
putative two component system histidine kinase
Two-component system sensor histidine kinase {ECO:0000313|EMBL:BAD49487.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_1057_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4293..4730
DNA (438bp) protein (146aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I5X3_9BACE
hypothetical protein
Putative periplasmic protein {ECO:0000313|EMBL:EYE44064.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_068_000G1_scaffold_1057_5
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4746..5582
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JTT9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ25482.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_068_000G1_scaffold_1057_6
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5637..6542)
DNA (906bp) protein (302aa)
Clostripain-related protein n=10 Tax=Bacteroides RepID=Q64SN9_BACFR
clostripain-related protein
Clostripain-related protein {ECO:0000313|EMBL:CDD44382.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_000G1_scaffold_1057_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6652..7002)
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q64SN8_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD49491.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_1057_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7103..7963)
DNA (861bp) protein (287aa)
RNA polymerase sigma factor RpoD n=19 Tax=Bacteroides RepID=Q64SN7_BACFR
sigA; putative sigma factor A
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EYB08979.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_068_000G1_scaffold_1057_9
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8294..9841)
DNA (1548bp) protein (516aa)
Serine protease n=13 Tax=Bacteroides RepID=Q64SN5_BACFR
putative heat shock-related protease
Putative heat shock-related protease {ECO:0000313|EMBL:CDD44378.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_000G1_scaffold_1057_10
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10147..11481)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I3HLA6_BACFG
putative cysteine proteases
Putative cysteine proteases {ECO:0000313|EMBL:CDD44377.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_000G1_scaffold_1057_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11513..12664)
DNA (1152bp) protein (384aa)
Muconate cycloisomerase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64SN3_BACFR
muconate cycloisomerase
Muconate cycloisomerase {ECO:0000313|EMBL:BAD49496.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_1057_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12678..13880)
DNA (1203bp) protein (401aa)
Dipeptidyl peptidase VI n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64SN2_BACFR
dipeptidyl peptidase VI
Dipeptidyl peptidase VI {ECO:0000313|EMBL:BAD49497.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_1057_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14630..15949
DNA (1320bp) protein (440aa)
Ribonuclease BN n=6 Tax=Bacteroides fragilis RepID=Q64SN0_BACFR
ribonuclease BN
YihY family protein {ECO:0000313|EMBL:EKA85122.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_068_000G1_scaffold_1057_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16194..16733)
DNA (540bp) protein (180aa)
Nitroreductase family protein n=4 Tax=Bacteroides RepID=D1JTS8_9BACE
putative NAD(P)H nitroreductase
Nitroreductase family protein {ECO:0000313|EMBL:EXY40349.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L3_068_000G1_scaffold_1057_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16764..17366)
DNA (603bp) protein (201aa)
ribE; riboflavin synthase alpha chain (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EXZ53172.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EXZ53172.1};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Riboflavin synthase alpha chain n=14 Tax=Bacteroides RepID=E1WR81_BACF6
L3_068_000G1_scaffold_1057_16
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17548..17637)
DNA (90bp) protein (30aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=I0PYP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD44368.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_000G1_scaffold_1057_17
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17764..18453)
DNA (690bp) protein (230aa)
Phosphate-specific transport system accessory protein PhoU n=14 Tax=Bacteroides RepID=E1WR82_BACF6
putative phosphate transport chemotaxis-related protein
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_000G1_scaffold_1057_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18529..19290)
DNA (762bp) protein (254aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
Phosphate import ATP-binding protein PstB n=14 Tax=Bacteroides RepID=PSTB_BACFN
pstB; phosphate import ATP-binding protein
L3_068_000G1_scaffold_1057_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19326..20201)
DNA (876bp) protein (292aa)
Phosphate transport system permease protein n=14 Tax=Bacteroides RepID=E1WR84_BACF6
pstA; phosphate transport system permease protein
Phosphate ABC transporter, permease PstA {ECO:0000313|EMBL:EKA85116.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_068_000G1_scaffold_1057_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20203..21399)
DNA (1197bp) protein (399aa)
Phosphate ABC transporter, permease PstC n=13 Tax=Bacteroides RepID=C6I5Z0_9BACE
putative phosphate-related ABC transport system, membrane protein
Phosphate ABC transporter, permease PstC {ECO:0000313|EMBL:EKA85115.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_068_000G1_scaffold_1057_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21684..22535
DNA (852bp) protein (284aa)
Phosphate binding protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I5Z1_9BACE
putative phosphate-related ABC transport system, exported protein
Phosphate binding protein {ECO:0000313|EMBL:EIY92580.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000G1_scaffold_1057_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22606..24345
DNA (1740bp) protein (580aa)
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
Glutaminyl-tRNA synthetase n=11 Tax=Bacteroides RepID=E1WR87_BACF6
L3_068_000G1_scaffold_1057_23
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24444..24611
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HLB9_BACFG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD44360.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
Displaying 23 items

View Taxonomy