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L3_068_000G1_scaffold_1238

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_1238_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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217..765
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=10 Tax=Bacteroides RepID=Q64RM9_BACFR
putative sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKA85444.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_068_000G1_scaffold_1238_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(784..2160)
DNA (1377bp) protein (459aa)
Outer membrane protein oprM n=9 Tax=Bacteroides RepID=Q64RM8_BACFR
putative puter membrane protein
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:EYB08893.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_068_000G1_scaffold_1238_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2164..5343)
DNA (3180bp) protein (1060aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=9 Tax=Bacteroides RepID=C6I6J3_9BACE
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY90917.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
acrD; putative aminoglycoside efflux pump
L3_068_000G1_scaffold_1238_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5404..6594)
DNA (1191bp) protein (397aa)
Acriflavine resistance protein A n=6 Tax=Bacteroides RepID=Q64RM6_BACFR
putative acriflavine resistance protein E precursor
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EXY40131.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L3_068_000G1_scaffold_1238_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6913..9123
DNA (2211bp) protein (737aa)
Putative patatin-like phospholipase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64RM5_BACFR
Putative patatin-like phospholipase {ECO:0000313|EMBL:BAD49856.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
putative patatin-like phospholipase
L3_068_000G1_scaffold_1238_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9372..9641
DNA (270bp) protein (90aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WSA7_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY90920.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_068_000G1_scaffold_1238_7
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9644..10201
DNA (558bp) protein (186aa)
Acyltransferase family protein n=14 Tax=Bacteroides RepID=Q64RM3_BACFR
putative acyltransferase
Acyltransferase family protein {ECO:0000313|EMBL:CDD41897.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_068_000G1_scaffold_1238_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10208..10978
DNA (771bp) protein (257aa)
Putative amidohydrolase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64RM2_BACFR
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:BAD49859.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_068_000G1_scaffold_1238_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11116..12282
DNA (1167bp) protein (389aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
N-acetylglucosamine-6-phosphate deacetylase n=13 Tax=Bacteroides RepID=E1WSB0_BACF6
putative N-acetylglucosamine-6-phosphate deacetylase
L3_068_000G1_scaffold_1238_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12562..14553
DNA (1992bp) protein (664aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Glucosamine-6-phosphate isomerase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64RM0_BACFR
glucosamine-6-phosphate isomerase
L3_068_000G1_scaffold_1238_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14597..15370
DNA (774bp) protein (258aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6I6K1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY45340.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
L3_068_000G1_scaffold_1238_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15472..15648
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1GPU1_BACFG
hypothetical protein
Xanthan lyase {ECO:0000313|EMBL:BAD49863.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Displaying 12 items

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