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L3_068_000G1_scaffold_1425

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_1425_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1100)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G528_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54238.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_068_000G1_scaffold_1425_2
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1143..2069)
DNA (927bp) protein (309aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Bifidobacterium RepID=R5NBI0_9BIFI
dihydrodipicolinate synthase
L3_068_000G1_scaffold_1425_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2211..2966)
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Bifidobacterium RepID=B3DTC9_BIFLD
dapB; dihydrodipicolinate reductase
L3_068_000G1_scaffold_1425_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3225..4505)
DNA (1281bp) protein (427aa)
Possible transport protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MTV7_9BIFI
hypothetical protein
Possible transport protein {ECO:0000313|EMBL:AAN25000.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_068_000G1_scaffold_1425_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4718..8485)
DNA (3768bp) protein (1256aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
UvrD/REP helicase N-terminal domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AS27_BIFLN
ATP-dependent DNA helicase
L3_068_000G1_scaffold_1425_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8482..9723)
DNA (1242bp) protein (414aa)
UvrD4 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R006_BIFLM
hypothetical protein
Nuclease {ECO:0000313|EMBL:KEY23317.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_068_000G1_scaffold_1425_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9815..12673)
DNA (2859bp) protein (953aa)
PD-(D/E)XK nuclease family protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MT01_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEI81229.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L3_068_000G1_scaffold_1425_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12805..14226
DNA (1422bp) protein (474aa)
Kinase domain protein n=3 Tax=Bifidobacterium longum RepID=C2GUV3_BIFLN
Kinase domain protein {ECO:0000313|EMBL:EEI81230.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
kinase
L3_068_000G1_scaffold_1425_9
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14393..20377
DNA (5985bp) protein (1995aa)
Fibronectin type III domain-containing protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XY98_9BIFI
Fibronectin type III domain-containing protein {ECO:0000313|EMBL:EFV37402.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_1425_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20388..21761
DNA (1374bp) protein (458aa)
MoxR-like ATPase n=9 Tax=Bifidobacterium RepID=B3DTD5_BIFLD
ATPase AAA
Methanol dehydrogenase regulatory protein homolog {ECO:0000313|EMBL:CCY94888.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_068_000G1_scaffold_1425_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21786..23009
DNA (1224bp) protein (408aa)
PF01882 family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ARZ1_BIFLN
PF01882 family protein {ECO:0000313|EMBL:EIJ21884.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_068_000G1_scaffold_1425_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23006..23782
DNA (777bp) protein (259aa)
Transglutaminase like protein n=2 Tax=Bifidobacterium longum RepID=S3DM16_BIFLN
hypothetical protein
Transglutaminase {ECO:0000313|EMBL:AIW43405.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_000G1_scaffold_1425_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23772..25355
DNA (1584bp) protein (528aa)
Transglutaminase like protein n=2 Tax=Bifidobacterium longum RepID=S3DM16_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66079.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_068_000G1_scaffold_1425_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25534..25950
DNA (417bp) protein (139aa)
Serine/threonine protein phosphatase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D9Q3_BIFLN
phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CCY94891.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_068_000G1_scaffold_1425_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25977..26492
DNA (516bp) protein (172aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=C5E852_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54250.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_068_000G1_scaffold_1425_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26508..27140
DNA (633bp) protein (211aa)
Forkhead domain protein n=14 Tax=Bacteria RepID=E4R014_BIFLM
hypothetical protein
Signal peptide protein {ECO:0000313|EMBL:AIW43402.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_068_000G1_scaffold_1425_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27299..31336)
DNA (4038bp) protein (1346aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
DNA-directed RNA polymerase subunit beta' n=13 Tax=Bacteria RepID=RPOC_BIFLD
rpoC; rpoc
L3_068_000G1_scaffold_1425_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31504..35067)
DNA (3564bp) protein (1188aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
DNA-directed RNA polymerase subunit beta n=9 Tax=Bifidobacterium RepID=RPOB_BIFLO
rpoB; rpob
L3_068_000G1_scaffold_1425_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35078..35812)
DNA (735bp) protein (245aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=B3DTE3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ21868.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_068_000G1_scaffold_1425_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35915..36607)
DNA (693bp) protein (231aa)
A/G-specific DNA glycosylase n=10 Tax=Bifidobacterium RepID=B3DTE4_BIFLD
adenine glycosylase
Probable A/G-specific adenine glycosylase {ECO:0000313|EMBL:AAN25013.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Displaying 20 items

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