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L3_068_000G1_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_10_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(555..2405)
DNA (1851bp) protein (617aa)
ABC transporter, solute-binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N2Z9_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS19426.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
ABC-type spermidine/putrescine transport system, permease component II
L3_068_000G1_scaffold_10_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2383..3240)
DNA (858bp) protein (286aa)
ABC transporter, permease protein n=5 Tax=Erysipelotrichaceae RepID=B0N2Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48243.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_068_000G1_scaffold_10_3
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3240..4283)
DNA (1044bp) protein (348aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
spermidine/putrescine ABC transporter ATP-binding subunit (EC:3.6.3.31)
Polyamine ABC transporter, ATP-binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N2Z7_9FIRM
L3_068_000G1_scaffold_10_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4294..4827)
DNA (534bp) protein (178aa)
Cupin domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N2Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31526.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
XRE family transcriptional regulator
L3_068_000G1_scaffold_10_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4957..5787)
DNA (831bp) protein (277aa)
tyrA; prephenate dehydrogenase TyrA (EC:1.3.1.12)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R1D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91973.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_068_000G1_scaffold_10_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5886..6269)
DNA (384bp) protein (128aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91972.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_068_000G1_scaffold_10_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6287..7747)
DNA (1461bp) protein (487aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Nicotinate phosphoribosyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N2Z3_9FIRM
nicotinate phosphoribosyltransferase
L3_068_000G1_scaffold_10_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7813..8133)
DNA (321bp) protein (107aa)
LysM domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N2Z2_9FIRM
LysM domain protein {ECO:0000313|EMBL:EDS19419.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_068_000G1_scaffold_10_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8194..8874)
DNA (681bp) protein (227aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Ribonuclease 3 n=4 Tax=Erysipelotrichaceae RepID=B0N2Z1_9FIRM
rncS; ribonuclease III
L3_068_000G1_scaffold_10_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8876..9850)
DNA (975bp) protein (325aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Phosphate acyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N2Z0_9FIRM
plsX; fatty acid/phospholipid synthesis protein PlsX
L3_068_000G1_scaffold_10_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9888..11906)
DNA (2019bp) protein (673aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDS19416.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS19416.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N2Y9_9FIRM
ATP-dependent DNA helicase RecG
L3_068_000G1_scaffold_10_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11954..12865)
DNA (912bp) protein (304aa)
Transporter, auxin efflux carrier (AEC) family protein n=5 Tax=Erysipelotrichaceae RepID=B0N2Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31519.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative permease
L3_068_000G1_scaffold_10_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12968..13300)
DNA (333bp) protein (111aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=4 Tax=Erysipelotrichaceae RepID=B0N2Y7_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EDS19414.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PTS system beta-glucoside-specific, IIB component
L3_068_000G1_scaffold_10_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13424..14254)
DNA (831bp) protein (277aa)
PRD domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N2Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91964.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcriptional antiterminator BglG
L3_068_000G1_scaffold_10_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14544..14774)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N2Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19412.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_068_000G1_scaffold_10_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15017..15322)
DNA (306bp) protein (102aa)
ptsG; putative PTS system glucose-specific EIICBA component (EC:2.7.1.69)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N2Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35470.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_068_000G1_scaffold_10_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15567..15770)
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35471.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L3_068_000G1_scaffold_10_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16102..18843)
DNA (2742bp) protein (914aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R1B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91960.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
cell wall surface anchor family protein, putative lipoprotein
L3_068_000G1_scaffold_10_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19070..19759)
DNA (690bp) protein (230aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32975.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_068_000G1_scaffold_10_20
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19876..20982)
DNA (1107bp) protein (369aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Alanine dehydrogenase n=4 Tax=Erysipelotrichaceae RepID=B0N2X7_9FIRM
hypothetical protein
L3_068_000G1_scaffold_10_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21164..22048)
DNA (885bp) protein (295aa)
Transcriptional regulator, LysR family n=4 Tax=Erysipelotrichaceae RepID=B0N2X6_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDS19403.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcriptional regulator
L3_068_000G1_scaffold_10_22
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22193..23518)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=4 Tax=Erysipelotrichaceae RepID=B0N2X5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHQ48224.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
mate efflux family protein
L3_068_000G1_scaffold_10_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23852..24781
DNA (930bp) protein (310aa)
Site-specific recombinase, phage integrase family n=5 Tax=Erysipelotrichaceae RepID=B0N2X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48223.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Site-specific recombinase XerD
L3_068_000G1_scaffold_10_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26174..27829)
DNA (1656bp) protein (552aa)
DAK2 domain fusion protein YloV n=4 Tax=Erysipelotrichaceae RepID=B0N2X3_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EDS19400.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DAK2 domain-containing protein YloV
L3_068_000G1_scaffold_10_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27842..28198)
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48221.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_10_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


28428..28613
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=5 Tax=Erysipelotrichaceae RepID=B0N2X1_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
rpmB; 50S ribosomal protein L28
L3_068_000G1_scaffold_10_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28813..30171
DNA (1359bp) protein (453aa)
Glycosyl hydrolase, family 1 n=3 Tax=Erysipelotrichaceae RepID=B0N2X0_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EDS19397.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
beta-glucosidase
L3_068_000G1_scaffold_10_28
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30263..31081
DNA (819bp) protein (273aa)
YihY family protein n=2 Tax=Erysipelotrichaceae RepID=H1AGT6_9FIRM
YihY family protein {ECO:0000313|EMBL:EHQ48218.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ribonuclease bn
L3_068_000G1_scaffold_10_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31117..32241)
DNA (1125bp) protein (375aa)
Chaperone protein DnaJ n=3 Tax=Erysipelotrichaceae RepID=B0N2W8_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
chaperone protein DnaJ
L3_068_000G1_scaffold_10_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32302..34119)
DNA (1818bp) protein (606aa)
Chaperone protein DnaK n=5 Tax=Erysipelotrichaceae RepID=B0N2W7_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
dnaK; chaperone protein DnaK
Displaying items 1-30 of 182 in total

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