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L3_068_000G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_61_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(177..1046)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEV02259.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
transcriptional regulator, AraC family
L3_068_000G1_scaffold_61_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1055..2377)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=3 Tax=Roseburia RepID=C7G756_9FIRM
putative efflux protein, MATE family
MATE efflux family protein {ECO:0000313|EMBL:EEV02260.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_000G1_scaffold_61_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2657..3583
DNA (927bp) protein (309aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G757_9FIRM
L3_068_000G1_scaffold_61_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3599..4909
DNA (1311bp) protein (437aa)
Alpha amylase, catalytic domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G758_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEV02262.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Glycosidases
L3_068_000G1_scaffold_61_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4996..5451)
DNA (456bp) protein (152aa)
Uncharacterized protein conserved in bacteria n=4 Tax=Roseburia RepID=D4KMI7_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDA54074.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000G1_scaffold_61_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5522..6169)
DNA (648bp) protein (216aa)
Stage II sporulation protein R n=2 Tax=Roseburia RepID=D4KMI6_9FIRM
Stage II sporulation protein R {ECO:0000313|EMBL:EEV02264.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
stage II sporulation protein R
L3_068_000G1_scaffold_61_7
unknown

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6324..6611
DNA (288bp) protein (96aa)

This feature has no annotations

L3_068_000G1_scaffold_61_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6621..8714)
DNA (2094bp) protein (698aa)
Spore germination protein (Amino acid permease) n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G761_9FIRM
Spore germination protein (Amino acid permease) {ECO:0000313|EMBL:EEV02265.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Spore germination protein.
L3_068_000G1_scaffold_61_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8763..10241)
DNA (1479bp) protein (493aa)
Bacillus/Clostridium GerA spore germination protein n=4 Tax=Roseburia RepID=D4KZ56_9FIRM
Bacillus/Clostridium GerA spore germination protein.
Bacillus/Clostridium GerA spore germination protein {ECO:0000313|EMBL:CDA54077.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000G1_scaffold_61_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10349..11023)
DNA (675bp) protein (225aa)
Transcriptional regulator, GntR family n=4 Tax=Roseburia RepID=D4KMI2_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA54078.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000G1_scaffold_61_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11050..11928)
DNA (879bp) protein (293aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=3 Tax=Roseburia RepID=D4KZ54_9FIRM
L3_068_000G1_scaffold_61_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12107..12730
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7G765_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08082.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_61_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12868..14154)
DNA (1287bp) protein (429aa)
Transcriptional regulator n=4 Tax=Roseburia RepID=D4KMH9_9FIRM
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EEV02270.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_000G1_scaffold_61_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14193..15524)
DNA (1332bp) protein (444aa)
ATPase related to the helicase subunit of the Holliday junction resolvase n=4 Tax=Roseburia RepID=D4KMH8_9FIRM
ATPase related to the helicase subunit of the Holliday junction resolvase
ATPase related to the helicase subunit of the Holliday junction resolvase {ECO:0000313|EMBL:CBL12641.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_61_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15754..16947)
DNA (1194bp) protein (398aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000313|EMBL:CBL08077.1}; EC=6.3.2.9 {ECO:0000313|EMBL:CBL08077.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KMH5_9FIRM
L3_068_000G1_scaffold_61_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16997..18322)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B573_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54086.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_068_000G1_scaffold_61_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18526..20064)
DNA (1539bp) protein (513aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=2 Tax=Roseburia RepID=D4KMH4_9FIRM
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain {ECO:0000313|EMBL:CDA54087.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000G1_scaffold_61_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20174..21544)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G771_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54088.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_068_000G1_scaffold_61_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21548..22519)
DNA (972bp) protein (324aa)
Predicted glycosyltransferases n=2 Tax=Roseburia intestinalis RepID=D4KMH1_9FIRM
Predicted glycosyltransferases
Predicted glycosyltransferases {ECO:0000313|EMBL:CBL12634.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_61_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22519..23622)
DNA (1104bp) protein (368aa)
Cell envelope-related function transcriptional attenuator common domain n=2 Tax=Roseburia RepID=D4KZ43_9FIRM
cell envelope-related function transcriptional attenuator common domain
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CDA54090.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000G1_scaffold_61_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23635..25053)
DNA (1419bp) protein (473aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ42_9FIRM
Undecaprenyl-phosphate glucose phosphotransferase
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CBL12632.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_61_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25201..26157)
DNA (957bp) protein (319aa)
Predicted glycosyltransferases n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BL78_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CDA54092.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted glycosyltransferases
L3_068_000G1_scaffold_61_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26169..28145)
DNA (1977bp) protein (659aa)
Predicted glycosyltransferases n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6APZ2_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CDA54093.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted glycosyltransferases
L3_068_000G1_scaffold_61_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28112..28312)
DNA (201bp) protein (67aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G778_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12629.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_61_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28344..30833)
DNA (2490bp) protein (830aa)
Predicted glycosyltransferases n=2 Tax=Roseburia intestinalis RepID=D4KMG5_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CBL08067.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Predicted glycosyltransferases
L3_068_000G1_scaffold_61_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30849..32033)
DNA (1185bp) protein (395aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CBL08066.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CBL08066.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Nucleotide sugar dehydrogenase n=3 Tax=Roseburia intestinalis RepID=D4KMG4_9FIRM
L3_068_000G1_scaffold_61_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32239..33162
DNA (924bp) protein (308aa)
Predicted hydrolase (Metallo-beta-lactamase superfamily) n=2 Tax=Roseburia intestinalis RepID=D4KMG3_9FIRM
Predicted hydrolase (metallo-beta-lactamase superfamily)
Predicted hydrolase (Metallo-beta-lactamase superfamily) {ECO:0000313|EMBL:CBL08065.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_61_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33303..34715)
DNA (1413bp) protein (471aa)
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KMG2_9FIRM
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component {ECO:0000313|EMBL:CBL08064.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_61_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34702..35076)
DNA (375bp) protein (125aa)
Predicted transcriptional regulator n=4 Tax=Roseburia RepID=D4KMG1_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CDA54102.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000G1_scaffold_61_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35309..36646)
DNA (1338bp) protein (446aa)
Mannose-1-phosphate guanylyltransferase (EC:5.3.1.8)
Mannose-1-phosphate guanylyltransferase n=2 Tax=Roseburia RepID=D4KZ34_9FIRM
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:CDA54103.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 93 in total

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