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L3_068_000G1_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_62_1
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

409..2004
DNA (1596bp) protein (532aa)
TIGR02677 family protein n=2 Tax=Roseburia RepID=C7G9S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54700.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
conserved hypothetical protein TIGR02677
L3_068_000G1_scaffold_62_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2001..3146
DNA (1146bp) protein (382aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6B112_9FIRM
conserved hypothetical protein TIGR02678
Uncharacterized protein {ECO:0000313|EMBL:CDA54699.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000G1_scaffold_62_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3136..7245
DNA (4110bp) protein (1370aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L252_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL13692.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
conserved hypothetical protein TIGR02680
L3_068_000G1_scaffold_62_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7223..8503
DNA (1281bp) protein (427aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6BMY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54697.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_068_000G1_scaffold_62_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8535..8768
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KLC6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07678.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_62_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8755..10482
DNA (1728bp) protein (576aa)
Putative HAMP domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B6Q3_9FIRM
Putative HAMP domain protein {ECO:0000313|EMBL:CDA54696.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Methyl-accepting chemotaxis protein
L3_068_000G1_scaffold_62_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10520..11755
DNA (1236bp) protein (412aa)
Uncharacterized conserved protein related to MYG1 family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L256_9FIRM
Uncharacterized conserved protein related to MYG1 family
Uncharacterized conserved protein related to MYG1 family {ECO:0000313|EMBL:CBL13696.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_62_8
unknown

Not on your lists

comp(11696..11830)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_068_000G1_scaffold_62_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11992..13371
DNA (1380bp) protein (460aa)
Na+ driven multidrug efflux pump n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B106_9FIRM
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:CDA54694.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
MATE family multidrug resistance protein
L3_068_000G1_scaffold_62_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13430..14110
DNA (681bp) protein (227aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Phosphoglycerate mutase family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9S0_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEV01428.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_000G1_scaffold_62_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14139..15623
DNA (1485bp) protein (495aa)
dipeptidase A. Cysteine peptidase. MEROPS family C69 (EC:3.4.-.-)
Dipeptidase A. Cysteine peptidase. MEROPS family C69 {ECO:0000313|EMBL:CBL07681.1}; EC=3.4.-.- {ECO:0000313|EMBL:CBL07681.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Dipeptidase A. Cysteine peptidase. MEROPS family C69 n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLC9_9FIRM
L3_068_000G1_scaffold_62_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15663..16622
DNA (960bp) protein (320aa)
Immunogenic protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B6P9_9FIRM
Immunogenic protein {ECO:0000313|EMBL:CDA54691.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
TRAP transporter solute receptor, TAXI family
L3_068_000G1_scaffold_62_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16678..17865
DNA (1188bp) protein (396aa)
Sodium/glutamate symporter n=2 Tax=Roseburia RepID=C7G9R7_9FIRM
Sodium/glutamate symporter {ECO:0000313|EMBL:CDA54690.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
sodium--glutamate symport carrier (gltS)
L3_068_000G1_scaffold_62_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17885..18064
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7G9R6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07683.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_62_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18082..19017
DNA (936bp) protein (312aa)
Kinase, PfkB family n=2 Tax=Roseburia RepID=C7G9R5_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CDA54688.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Sugar kinases, ribokinase family
L3_068_000G1_scaffold_62_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19183..19437
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01475.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_068_000G1_scaffold_62_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19589..19714
DNA (126bp) protein (42aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G9R3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54686.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000G1_scaffold_62_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19856..20341
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7G9R2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13704.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_62_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20401..21285
DNA (885bp) protein (295aa)
Uncharacterized conserved protein n=3 Tax=Roseburia RepID=D4L265_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL13705.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_62_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21298..22203
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9R0_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEV01471.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Transcriptional regulator
L3_068_000G1_scaffold_62_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22326..22442
DNA (117bp) protein (39aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6BMX1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07690.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_62_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22540..23622
DNA (1083bp) protein (361aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9Q9_9FIRM
ABC-type metal ion transport system, ATPase component
L3_068_000G1_scaffold_62_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23612..24271
DNA (660bp) protein (220aa)
ABC-type metal ion transport system, permease component n=2 Tax=Roseburia intestinalis RepID=D4KLE0_9FIRM
ABC-type metal ion transport system, permease component
ABC transporter, permease protein {ECO:0000313|EMBL:EEV01469.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_068_000G1_scaffold_62_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24429..25382
DNA (954bp) protein (318aa)
ABC-type metal ion transport system, periplasmic component/surface antigen n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L270_9FIRM
ABC-type metal ion transport system, periplasmic component/surface antigen
ABC-type metal ion transport system, periplasmic component/surface antigen {ECO:0000313|EMBL:CBL13710.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_068_000G1_scaffold_62_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25636..25842
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLE2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07694.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_62_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25887..26120
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G9Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01466.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_068_000G1_scaffold_62_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26375..27556
DNA (1182bp) protein (394aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G9Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01464.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Esterase/lipase
L3_068_000G1_scaffold_62_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27634..28344
DNA (711bp) protein (237aa)
Uncharacterised protein family (UPF0153) n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLE5_9FIRM
Uncharacterised protein family (UPF0153).
Uncharacterised protein family (UPF0153) {ECO:0000313|EMBL:CBL07697.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_068_000G1_scaffold_62_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28464..28829
DNA (366bp) protein (122aa)
LrgA family protein n=3 Tax=Roseburia RepID=C7G9Q1_9FIRM
LrgA family protein {ECO:0000313|EMBL:CDA54669.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Putative effector of murein hydrolase LrgA
L3_068_000G1_scaffold_62_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28826..29518
DNA (693bp) protein (231aa)
Putative effector of murein hydrolase n=3 Tax=Roseburia RepID=D4KLE7_9FIRM
Putative effector of murein hydrolase
Putative effector of murein hydrolase {ECO:0000313|EMBL:CDA54667.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 93 in total

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