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L3_068_000G1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_63_1
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..513)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30234.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_068_000G1_scaffold_63_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(534..1526)
DNA (993bp) protein (331aa)
Lysozyme-like family protein n=1 Tax=Clostridium difficile P28 RepID=T4P5B2_CLODI
Lysozyme-like family protein {ECO:0000313|EMBL:EQJ62894.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_068_000G1_scaffold_63_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1538..3661)
DNA (2124bp) protein (708aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4P535_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ62895.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative membrane protein Tn916-like,CTn1-Orf18
L3_068_000G1_scaffold_63_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3661..6111)
DNA (2451bp) protein (817aa)
AAA-like domain protein n=1 Tax=Clostridium difficile P28 RepID=T4P617_CLODI
AAA-like domain protein {ECO:0000313|EMBL:EQJ62896.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_068_000G1_scaffold_63_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6098..6487)
DNA (390bp) protein (130aa)
TcpE family protein n=1 Tax=Clostridium difficile P28 RepID=T4P5L6_CLODI
TcpE family protein {ECO:0000313|EMBL:EQJ62897.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
conjugative transposon protein
L3_068_000G1_scaffold_63_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6601..7104)
DNA (504bp) protein (168aa)
Antirestriction family protein n=1 Tax=Clostridium difficile P28 RepID=T4NZG8_CLODI
Antirestriction family protein {ECO:0000313|EMBL:EQJ62898.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Antirestriction protein
L3_068_000G1_scaffold_63_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7122..7619)
DNA (498bp) protein (166aa)
Antirestriction family protein n=1 Tax=Clostridium difficile P28 RepID=T4P5B6_CLODI
Antirestriction family protein {ECO:0000313|EMBL:EQJ62899.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
conjugative transposon protein
L3_068_000G1_scaffold_63_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7815..8300)
DNA (486bp) protein (162aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=T2TJ42_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ62900.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_068_000G1_scaffold_63_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8388..8609)
DNA (222bp) protein (74aa)
Conjugative transposon protein n=10 Tax=Clostridiales RepID=C9XSM7_CLODC
conjugative transposon protein
Conjugative transposon protein {ECO:0000313|EMBL:CBE07565.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_068_000G1_scaffold_63_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8610..8744)
DNA (135bp) protein (45aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T2TJW5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ62903.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_068_000G1_scaffold_63_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8759..9922)
DNA (1164bp) protein (388aa)
Replication initiation factor family protein n=1 Tax=Clostridium difficile P28 RepID=T4P5C1_CLODI
Replication initiation factor family protein {ECO:0000313|EMBL:EQJ62904.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative replication initiation factorTn916-like, CTn1-Orf26
L3_068_000G1_scaffold_63_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10141..11535)
DNA (1395bp) protein (465aa)
FtsK/SpoIIIE family protein n=6 Tax=Clostridium difficile RepID=T2TJQ3_CLODI
conjugative transposon FtsK/SpoIIIE-like protein
Putative conjugative transposon FtsK_SpoIIIE-related protein {ECO:0000313|EMBL:CBE07562.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_068_000G1_scaffold_63_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11635..12177)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD69 RepID=T3A6K1_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE69749.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_068_000G1_scaffold_63_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12241..12942)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MLJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71673.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_068_000G1_scaffold_63_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13006..13446)
DNA (441bp) protein (147aa)
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein n=8 Tax=Clostridium difficile RepID=T2V613_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE07556.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_068_000G1_scaffold_63_16
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13519..13968)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MPG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72945.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L3_068_000G1_scaffold_63_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14046..14429)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4P5M8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ62907.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
conjugative transposon protein
L3_068_000G1_scaffold_63_18
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14444..14767)
DNA (324bp) protein (108aa)
Uncharacterized protein n=10 Tax=Clostridiales RepID=C0EEA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30256.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
conjugative transposon protein
L3_068_000G1_scaffold_63_19
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14992..18039)
DNA (3048bp) protein (1016aa)
LPXTG cell wall anchor domain protein n=1 Tax=Clostridium difficile CD69 RepID=T3A374_CLODI
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEG30257.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_068_000G1_scaffold_63_20
unknown

Not on your lists

18349..18651
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHG9_9FIRM
L3_068_000G1_scaffold_63_21
unknown

Not on your lists

18669..18818
DNA (150bp) protein (50aa)

This feature has no annotations

L3_068_000G1_scaffold_63_22
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18824..19129
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHH0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48221.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Predicted ribosomal protein
L3_068_000G1_scaffold_63_23
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19281..19925
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHH1_9FIRM
Phage scaffold protein {ECO:0000313|EMBL:CCY66826.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
phage capsid and scaffold protein
L3_068_000G1_scaffold_63_24
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19942..20856
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHH2_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48223.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
phage protein
L3_068_000G1_scaffold_63_25
Staphylococcus haemolyticus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20874..21146
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHH3_9FIRM
hypothetical protein
Staphylococcus haemolyticus JCSC1435 DNA, complete genome {ECO:0000313|EMBL:BAE05662.1}; TaxID=279808 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemolyticus (strain JCSC1435).;"
L3_068_000G1_scaffold_63_26
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21146..21481
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHH4_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48225.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
ps131; hypothetical protein
L3_068_000G1_scaffold_63_27
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

21478..21780
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHH5_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH86162.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_068_000G1_scaffold_63_28
Facklamia hominis, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21780..22130
DNA (351bp) protein (117aa)
HK97 gp10 family phage protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHH6_9FIRM
HK97 gp10 family phage protein {ECO:0000313|EMBL:EKB54463.1}; TaxID=883111 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia hominis CCUG 36813.;"
phage protein
L3_068_000G1_scaffold_63_29
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22142..22528
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58799.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L3_068_000G1_scaffold_63_30
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22542..23078
DNA (537bp) protein (179aa)
TP901-1 family phage major tail protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58800.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
phage major tail protein
Displaying items 1-30 of 109 in total

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