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L3_068_000G1_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_65_1
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..936
DNA (936bp) protein (312aa)
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00197180}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00197180};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Phosphofructokinase n=4 Tax=Klebsiella RepID=G8WB26_KLEOK
6-phosphofructokinase
L3_068_000G1_scaffold_65_2
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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948..1262
DNA (315bp) protein (105aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=2 Tax=Salmonella houtenae RepID=H7EER7_SALHO
Putative phosphotransferase system enzyme IIB component {ECO:0000313|EMBL:GAL51634.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
PTS lactose transporter subunit IIB
L3_068_000G1_scaffold_65_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1255..2622
DNA (1368bp) protein (456aa)
PTS system ascorbate-specific IIC component n=1 Tax=Klebsiella pneumoniae MGH 40 RepID=V3L1K9_KLEPN
PTS ascorbate transporter subunit IIC {ECO:0000313|EMBL:KEY49894.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
sugar-specific permease SgaT/UlaA
L3_068_000G1_scaffold_65_4
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2609..3451
DNA (843bp) protein (281aa)
iron ABC transporter substrate-binding protein n=1 Tax=Klebsiella oxytoca RepID=UPI0002E4DE74
Putative ketose-bisphosphate aldolase {ECO:0000313|EMBL:GAL51636.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Tagatose 1,6-bisphosphate aldolase
L3_068_000G1_scaffold_65_5
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3511..3780
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Klebsiella oxytoca RepID=UPI0003088A8F
Uncharacterized protein {ECO:0000313|EMBL:GAL51637.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_000G1_scaffold_65_6
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3813..4250
DNA (438bp) protein (146aa)
PTS IIA-like nitrogen-regulatory protein PtsN n=2 Tax=Klebsiella oxytoca RepID=G8WB31_KLEOK
Putative phosphotransferase system enzyme IIA component {ECO:0000313|EMBL:GAL51638.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
PTS system ascorbate-specific transporter
L3_068_000G1_scaffold_65_7
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4247..4807
DNA (561bp) protein (187aa)
Glucokinase n=2 Tax=Salmonella houtenae RepID=R0ERT0_SALHO
Uncharacterized protein {ECO:0000313|EMBL:GAL51639.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
glucokinase
L3_068_000G1_scaffold_65_8
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4854..5177)
DNA (324bp) protein (108aa)
Branched-chain amino acid transport protein n=3 Tax=Salmonella houtenae RepID=H7EES3_SALHO
Uncharacterized protein {ECO:0000313|EMBL:GAL51640.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_000G1_scaffold_65_9
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5177..5836)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) RepID=A9MI72_SALAR
Putative LIV-E family transporter {ECO:0000313|EMBL:GAL51641.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_000G1_scaffold_65_10
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5935..6543
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AL35_CITK8
Putative Xre family transcriptional regulator {ECO:0000313|EMBL:GAL51642.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_000G1_scaffold_65_11
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6821..8212
DNA (1392bp) protein (464aa)
Glycoporin RafY n=20 Tax=Escherichia coli RepID=B3HX91_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:GAL51643.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_068_000G1_scaffold_65_12
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8255..8569)
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00169483};; Rhamnose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01663}; Type-3 mutarotase {ECO:0000256|HAMAP-Rule:MF_01663}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L-rhamnose mutarotase n=1 Tax=Salmonella enterica subsp. enterica serovar Worthington str. ATCC 9607 RepID=V1I215_SALET
SBOV41211; conserved hypothetical protein
L3_068_000G1_scaffold_65_13
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8566..9714)
DNA (1149bp) protein (383aa)
Lactaldehyde reductase n=1 Tax=Shigella flexneri 1235-66 RepID=I6HF17_SHIFL
Putative alcohol dehydrogenase {ECO:0000313|EMBL:GAL51645.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
alcohol dehydrogenase
L3_068_000G1_scaffold_65_14
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9775..10779)
DNA (1005bp) protein (335aa)
Ribose ABC superfamily ATP binding cassette transporter permease n=1 Tax=Enterobacter hormaechei ATCC 49162 RepID=F5RR99_9ENTR
Putative sugar ABC transporter permease protein {ECO:0000313|EMBL:GAL51646.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
branched-chain amino acid ABC transporter permease
L3_068_000G1_scaffold_65_15
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10776..11780)
DNA (1005bp) protein (335aa)
Rhamnose ABC transporter membrane protein n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WG97_ENT38
Uncharacterized protein {ECO:0000313|EMBL:KDF10872.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
inner-membrane translocator
L3_068_000G1_scaffold_65_16
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11780..13285)
DNA (1506bp) protein (502aa)
D-ribose transporter ATP binding protein n=1 Tax=Enterobacter cloacae RepID=UPI0002D51A65
Uncharacterized protein {ECO:0000313|EMBL:AKE60901.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_068_000G1_scaffold_65_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13405..14391)
DNA (987bp) protein (329aa)
Rhamnose ABC transporter, rhamnose-binding protein n=3 Tax=Klebsiella oxytoca RepID=H3LW40_KLEOX
Putative sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAL51649.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L-rhamnose ABC transporter
L3_068_000G1_scaffold_65_18
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14491..15318)
DNA (828bp) protein (276aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
rhaD; rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
rhamnulose-1-phosphate aldolase n=1 Tax=Salmonella choleraesuis RepID=UPI0002B94DB1
L3_068_000G1_scaffold_65_19
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15729..16988)
DNA (1260bp) protein (420aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L-rhamnose isomerase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9S942_CITFR
L-rhamnose isomerase
L3_068_000G1_scaffold_65_20
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16985..18454)
DNA (1470bp) protein (490aa)
Rhamnulokinase {ECO:0000256|HAMAP-Rule:MF_01535}; Short=RhaB {ECO:0000256|HAMAP-Rule:MF_01535};; EC=2.7.1.5 {ECO:0000256|HAMAP-Rule:MF_01535};; ATP:L-rhamnulose phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01535}; L-rhamnulose 1-kinase {ECO:0000256|HAMAP-Rule:MF_01535}; Rhamnulose kinase {ECO:0000256|HAMAP-Rule:MF_01535}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
rhaB; rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TU85_CITRI
L3_068_000G1_scaffold_65_21
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18755..19591
DNA (837bp) protein (279aa)
HTH-type transcriptional activator RhaS n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=RHAS_CITK8
HTH-type transcriptional activator RhaS {ECO:0000256|HAMAP-Rule:MF_01534, ECO:0000256|SAAS:SAAS00011458}; L-rhamnose operon regulatory protein RhaS {ECO:0000256|HAMAP-Rule:MF_01534}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
transcriptional activator RhaS
L3_068_000G1_scaffold_65_22
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19746..20594
DNA (849bp) protein (283aa)
HTH-type transcriptional activator RhaR n=1 Tax=Shigella flexneri 1235-66 RepID=I6HF10_SHIFL
HTH-type transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; L-rhamnose operon transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
rhaR; L-rhamnose operon transcriptional activator
L3_068_000G1_scaffold_65_23
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20591..21625)
DNA (1035bp) protein (345aa)
L-rhamnose-proton symporter n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TU82_CITRI
L-rhamnose-proton symporter {ECO:0000256|HAMAP-Rule:MF_01532, ECO:0000256|SAAS:SAAS00088063}; L-rhamnose-H(+) transport protein {ECO:0000256|HAMAP-Rule:MF_01532}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
rhamnose-proton symporter
L3_068_000G1_scaffold_65_24
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21912..22532
DNA (621bp) protein (207aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Superoxide dismutase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BEE8_9ENTR
superoxide dismutase
L3_068_000G1_scaffold_65_25
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22726..23709
DNA (984bp) protein (328aa)
2-keto-3-deoxygluconate permease n=1 Tax=Citrobacter sp. KTE151 RepID=R8WIU0_9ENTR
2-keto-3-deoxygluconate permease {ECO:0000256|HAMAP-Rule:MF_00070}; Short=KDG permease {ECO:0000256|HAMAP-Rule:MF_00070};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
2-keto-3-deoxygluconate permease
L3_068_000G1_scaffold_65_26
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23795..24685)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9S935_CITFR
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AKE60911.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
dihydrodipicolinate synthase
L3_068_000G1_scaffold_65_27
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24839..25510
DNA (672bp) protein (224aa)
Protein yiiM n=4 Tax=Escherichia coli RepID=L2VJD1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:GAL51659.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
yiiM; hypothetical protein
L3_068_000G1_scaffold_65_28
unknown

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25510..25767
DNA (258bp) protein (86aa)

This feature has no annotations

L3_068_000G1_scaffold_65_29
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25883..27256)
DNA (1374bp) protein (458aa)
Two-component sensor kinase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TU77_CITRI
Two-component sensor protein {ECO:0000313|EMBL:AKE60913.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cpxA; two-component sensor protein
L3_068_000G1_scaffold_65_30
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27253..27951)
DNA (699bp) protein (233aa)
Uncharacterized protein n=560 Tax=Salmonella choleraesuis RepID=A9MZE4_SALPB
transcriptional regulator
DNA-binding transcriptional regulator CpxR {ECO:0000313|EMBL:ESH14687.1}; TaxID=1124929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Derby str. 626.;"
Displaying items 1-30 of 100 in total

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