ggKbase home page

L3_068_000G1_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_85_1
unknown

Not on your lists

67..1473
DNA (1407bp) protein (469aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CBL37526.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBL37526.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
23S rRNA m(5)U-1939 methyltransferase n=2 Tax=Clostridiales RepID=D4MY31_9FIRM
L3_068_000G1_scaffold_85_2
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

1754..2284
DNA (531bp) protein (177aa)
Nitroreductase n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZIV3_9FIRM
Nitroreductase {ECO:0000313|EMBL:CDD48418.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
Nitroreductase
L3_068_000G1_scaffold_85_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2360..2821
DNA (462bp) protein (154aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium perfringens RepID=Q0TS83_CLOP1
acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT22444.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_068_000G1_scaffold_85_4
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2837..3550
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C744_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX59431.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_068_000G1_scaffold_85_5
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3540..4595
DNA (1056bp) protein (352aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C3K4_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47698.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
two-component sensor histidine kinase
L3_068_000G1_scaffold_85_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4625..4999
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1T3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78205.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_068_000G1_scaffold_85_7
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

5380..8922
DNA (3543bp) protein (1181aa)
Putative flagellar protein FliS n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6P0_9FIRM
Putative flagellar protein FliS {ECO:0000313|EMBL:CDB29201.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_068_000G1_scaffold_85_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9156..10697
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KP58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32693.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_068_000G1_scaffold_85_9
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10759..11808
DNA (1050bp) protein (350aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14)
Putative chlorophyll synthesis pathway protein BchC n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0R0_9CLOT
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EEG74397.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L3_068_000G1_scaffold_85_10
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12065..12841
DNA (777bp) protein (259aa)
3-oxoacyl-ACP reductase n=1 Tax=Bacillus acidiproducens RepID=UPI00037C2EF3
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KFN05861.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
short-chain dehydrogenase/reductase SDR
L3_068_000G1_scaffold_85_11
Treponema lecithinolyticum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12923..13909
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2KM93_TRELE
Uncharacterized protein {ECO:0000313|EMBL:ERJ93407.1}; TaxID=1321815 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema lecithinolyticum ATCC 700332.;"
putative monosaccharide-transporting ATPase
L3_068_000G1_scaffold_85_12
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13969..15477
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N528_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS78399.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
putative ABC transporter ATP-binding protein
L3_068_000G1_scaffold_85_13
Treponema lecithinolyticum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15481..16428
DNA (948bp) protein (316aa)
Putative L-arabinose ABC transporter, permease protein AraH n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2LVA5_TRELE
Putative L-arabinose ABC transporter, permease protein AraH {ECO:0000313|EMBL:ERJ93409.1}; TaxID=1321815 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema lecithinolyticum ATCC 700332.;"
rbsC1; ribose transport system permease RbsC
L3_068_000G1_scaffold_85_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16729..17865
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XP05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07997.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ROK family protein
L3_068_000G1_scaffold_85_15
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18043..18234
DNA (192bp) protein (64aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUC0_9CLOT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:EET87118.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
Ferredoxin
L3_068_000G1_scaffold_85_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

18504..20078
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003791E76
Putative dipeptide-binding protein {ECO:0000313|EMBL:CDC47827.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
peptide ABC transporter substrate-binding protein
L3_068_000G1_scaffold_85_17
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20104..21048
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003665CE4
Uncharacterized protein {ECO:0000313|EMBL:CDE66793.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
peptide ABC transporter permease
L3_068_000G1_scaffold_85_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

21062..21862
DNA (801bp) protein (267aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RR45_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDC47829.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
binding-protein-dependent transport systems inner membrane component
L3_068_000G1_scaffold_85_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

21864..22673
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000379BC59
ABC transporter related {ECO:0000313|EMBL:CDC47830.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
oligopeptide/dipeptide ABC transporter ATPase
L3_068_000G1_scaffold_85_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

22670..23386
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000377B57F
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC47831.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
putative ABC transporter ATP-binding protein
L3_068_000G1_scaffold_85_21
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23871..25934
DNA (2064bp) protein (688aa)
Probable potassium transport system protein kup n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GGT8_EUBLK
hypothetical protein
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_068_000G1_scaffold_85_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25956..26573
DNA (618bp) protein (206aa)
Pentapeptide repeats family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CV41_CLOSO
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:CEP79532.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
pentapeptide repeat-containing protein
L3_068_000G1_scaffold_85_23
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26648..27964)
DNA (1317bp) protein (439aa)
Amidohydrolase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIF4_CLOPH
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ABX42406.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_068_000G1_scaffold_85_24
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28098..29057)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z1X7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11102.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
inner-membrane translocator
L3_068_000G1_scaffold_85_25
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29057..30190)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z5L7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11101.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
inner-membrane translocator
L3_068_000G1_scaffold_85_26
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30187..31725)
DNA (1539bp) protein (513aa)
Simple sugar transport system ATP-binding protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZBE7_9CLOT
Simple sugar transport system ATP-binding protein {ECO:0000313|EMBL:EMZ11100.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
ABC transporter
L3_068_000G1_scaffold_85_27
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31936..33123)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. ACB1 RepID=G9WQ52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL09512.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
basic membrane lipoprotein
L3_068_000G1_scaffold_85_28
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33278..34366)
DNA (1089bp) protein (363aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
aIF-2BI family translation initiation factor (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TDD4_9FIRM
L3_068_000G1_scaffold_85_29
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34528..35364)
DNA (837bp) protein (279aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Purine nucleoside phosphorylase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIE8_CLOPH
inosine guanosine and xanthosine phosphorylase family protein
L3_068_000G1_scaffold_85_30
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35596..38133)
DNA (2538bp) protein (846aa)
Glycoside hydrolase family 43 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YI41_9FIRM
Glycoside hydrolase family 43 {ECO:0000313|EMBL:CDD35628.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Bacterial surface proteins containing Ig-like domains
Displaying items 1-30 of 79 in total

View Taxonomy