ggKbase home page

L3_068_000G1_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_101_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

370..2184
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75920.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Dockerin type I repeat.
L3_068_000G1_scaffold_101_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2265..4010)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75921.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_101_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4160..5065)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75922.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative peptidoglycan-binding domain-containing protein
L3_068_000G1_scaffold_101_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5251..5586)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75923.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_101_5
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5703..6290
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6LXX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78827.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
L3_068_000G1_scaffold_101_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6287..6997
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75925.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulator of the LytR/AlgR family
L3_068_000G1_scaffold_101_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7001..8464
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75926.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_101_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8467..8610
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5M0T9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98915.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_101_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8603..11233
DNA (2631bp) protein (877aa)
Type 2 lantibiotic biosynthesis protein LanM n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU8_9FIRM
Type 2 lantibiotic biosynthesis protein LanM {ECO:0000313|EMBL:EES75927.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Lantibiotic modifying enzyme
L3_068_000G1_scaffold_101_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11254..11784)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75928.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_101_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12003..12233
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75929.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_101_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12439..14553
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75930.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_101_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14563..14766)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75931.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_068_000G1_scaffold_101_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15292..16008
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75932.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_068_000G1_scaffold_101_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16009..19794
DNA (3786bp) protein (1262aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75933.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted permease.
L3_068_000G1_scaffold_101_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19901..21106
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78733.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative hydrolase
L3_068_000G1_scaffold_101_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21588..24242
DNA (2655bp) protein (885aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFV7_9FIRM
L3_068_000G1_scaffold_101_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24255..26291
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75937.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_068_000G1_scaffold_101_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26402..27700
DNA (1299bp) protein (433aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
FolC protein n=2 Tax=Ruminococcus RepID=C6JFV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77975.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_068_000G1_scaffold_101_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27697..27849
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75939.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_068_000G1_scaffold_101_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27860..29215
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77973.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_068_000G1_scaffold_101_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29422..29736
DNA (315bp) protein (105aa)
Anti-sigma F factor antagonist n=2 Tax=Ruminococcus RepID=C6JFW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77972.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
anti-anti-sigma factor
L3_068_000G1_scaffold_101_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29759..30184
DNA (426bp) protein (142aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=2 Tax=Ruminococcus RepID=C6JFW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77971.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_068_000G1_scaffold_101_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30187..30900
DNA (714bp) protein (238aa)
RNA polymerase sigma factor n=2 Tax=Ruminococcus RepID=C6JFW4_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
L3_068_000G1_scaffold_101_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30905..31129
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJ19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77965.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_068_000G1_scaffold_101_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31072..31569)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77963.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein
L3_068_000G1_scaffold_101_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31638..32252)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CJP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77962.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Stage V sporulation protein AA.
L3_068_000G1_scaffold_101_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32259..32615)
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=2 Tax=Ruminococcus RepID=C6JFW7_9FIRM
Stage V sporulation protein AE {ECO:0000313|EMBL:EES75946.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
SpoVA protein.
L3_068_000G1_scaffold_101_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32646..33728)
DNA (1083bp) protein (361aa)
Stage V sporulation protein AD n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIA6_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CDD77959.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Stage V sporulation protein AD (SpoVAD).
L3_068_000G1_scaffold_101_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33798..34262)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77957.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
SpoVA protein.
Displaying items 1-30 of 88 in total

View Taxonomy