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L3_068_000G1_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_068_000G1_scaffold_109_1
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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109..780
DNA (672bp) protein (224aa)
Telomeric repeat-binding factor 2 n=2 Tax=Roseburia RepID=D4KPE7_9FIRM
Telomeric repeat-binding factor 2.
Telomeric repeat-binding factor 2 {ECO:0000313|EMBL:CDA56381.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_068_000G1_scaffold_109_2
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1024..1221
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R5K075_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY54591.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
L3_068_000G1_scaffold_109_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1765..2505
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YQX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36280.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L3_068_000G1_scaffold_109_4
Shuttleworthia sp. MSX8B, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2587..3078
DNA (492bp) protein (164aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=936574 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia sp. MSX8B.;"
Ribonuclease H n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G985_9FIRM
hypothetical protein
L3_068_000G1_scaffold_109_5
Croceibacter phage P2559Y, Caudovirales, Viruses

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3020..3760
DNA (741bp) protein (247aa)
D12 class N6 adenine-specific DNA methyltransferase n=2 Tax=Bacteroides RepID=F3PQ45_9BACE
DNA methyltransferase {ECO:0000313|EMBL:AGM14108.1}; TaxID=1327037 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Croceibacter phage P2559Y.;"
hypothetical protein
L3_068_000G1_scaffold_109_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3753..4226
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZBQ9_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75791.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_068_000G1_scaffold_109_7
unknown

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4416..4577
DNA (162bp) protein (54aa)

This feature has no annotations

L3_068_000G1_scaffold_109_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4574..5062
DNA (489bp) protein (163aa)
DNA N-6-adenine-methyltransferase (Dam) n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAU8_CLOSV
DNA N-6-adenine-methyltransferase (Dam) {ECO:0000313|EMBL:EDS08256.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
phage N-6-adenine-methyltransferase
L3_068_000G1_scaffold_109_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5075..5335
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZBR3_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75795.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_068_000G1_scaffold_109_10
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5527..5823
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99278.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_068_000G1_scaffold_109_11
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5833..6129
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HZX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE43812.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L3_068_000G1_scaffold_109_12
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6126..6518
DNA (393bp) protein (131aa)
Single-stranded DNA-binding protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J8W6_9FIRM
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_068_000G1_scaffold_109_13
unknown

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6527..6787
DNA (261bp) protein (87aa)

This feature has no annotations

L3_068_000G1_scaffold_109_14
Lysinibacillus varians, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6801..7577
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002E92537
Cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:AHN23285.1}; TaxID=1145276 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus varians.;"
L3_068_000G1_scaffold_109_15
unknown

Not on your lists

7564..7767
DNA (204bp) protein (68aa)

This feature has no annotations

L3_068_000G1_scaffold_109_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7818..9179
DNA (1362bp) protein (454aa)
ParB-like protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z452_9FIRM
ParB-like protein {ECO:0000313|EMBL:EDM52262.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
ParB domain protein nuclease
L3_068_000G1_scaffold_109_17
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9181..9630
DNA (450bp) protein (150aa)
Toxin-antitoxin system toxin component PIN family n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SIL4_9FIRM
Toxin-antitoxin system toxin component PIN family {ECO:0000313|EMBL:CDC57389.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
L3_068_000G1_scaffold_109_18
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9654..9971
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9KAU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40572.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_068_000G1_scaffold_109_19
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9982..10293
DNA (312bp) protein (104aa)
PF12961 structural domain protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5Y974_9FIRM
PF12961 structural domain protein {ECO:0000313|EMBL:CDA13152.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
ASCH domain protein
L3_068_000G1_scaffold_109_20
unknown

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10280..10747
DNA (468bp) protein (156aa)

This feature has no annotations

L3_068_000G1_scaffold_109_21
unknown

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10757..11005
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MX09_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL37154.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_068_000G1_scaffold_109_22
unknown

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11002..11232
DNA (231bp) protein (77aa)

This feature has no annotations

L3_068_000G1_scaffold_109_23
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11214..11735
DNA (522bp) protein (174aa)
Exonuclease n=1 Tax=Clostridium sp. CAG:964 RepID=R6UMF5_9CLOT
Exonuclease {ECO:0000313|EMBL:CDC81406.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
Exonuclease RNase T and DNA polymerase III
L3_068_000G1_scaffold_109_24
unknown

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11830..12192
DNA (363bp) protein (121aa)

This feature has no annotations

L3_068_000G1_scaffold_109_25
unknown

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12152..12430
DNA (279bp) protein (93aa)

This feature has no annotations

L3_068_000G1_scaffold_109_26
unknown

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12432..13004
DNA (573bp) protein (191aa)

This feature has no annotations

L3_068_000G1_scaffold_109_27
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13179..13631
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JUV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38024.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Gp50 protein
L3_068_000G1_scaffold_109_28

Not on your lists

13736..14239
DNA (504bp) protein (168aa)
Phage terminase, small subunit, P27 family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDF9_CLOSV
P27 family terminase small subunit {ECO:0000313|EMBL:AJA42581.1}; TaxID=1567013 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT453B.;"
phage terminase, small subunit , P27 family
L3_068_000G1_scaffold_109_29
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14241..16013
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG1O-1 RepID=R8HZL5_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOO78310.1}; TaxID=1053167 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG1O-1.;"
prophage LambdaBa02, terminase, large subunit
L3_068_000G1_scaffold_109_30
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16010..17278
DNA (1269bp) protein (423aa)
Phage portal protein, HK97 family n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BV45_9CLOT
Portal protein {ECO:0000313|EMBL:CEP42760.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
phage portal protein, HK97 family
Displaying items 1-30 of 122 in total

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